Experiment: ALP with Cobalt chloride 0.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1608 and Dsui_1609 are separated by 49 nucleotides Dsui_1609 and Dsui_1610 are separated by 129 nucleotides
Dsui_1608: Dsui_1608 - hypothetical protein, at 1,692,396 to 1,692,704
_1608
Dsui_1609: Dsui_1609 - Thiopurine S-methyltransferase (TPMT), at 1,692,754 to 1,693,371
_1609
Dsui_1610: Dsui_1610 - Protein of unknown function (DUF3079), at 1,693,501 to 1,693,725
_1610
Position (kb)
1693
1694 Strain fitness (log2 ratio)
-2
-1
0
1 at 1692.519 kb on - strand at 1692.589 kb on + strand at 1692.658 kb on + strand at 1692.668 kb on + strand at 1692.758 kb on + strand at 1692.849 kb on - strand, within Dsui_1609 at 1692.929 kb on + strand, within Dsui_1609 at 1692.956 kb on + strand, within Dsui_1609 at 1692.985 kb on + strand, within Dsui_1609 at 1692.985 kb on + strand, within Dsui_1609 at 1693.373 kb on - strand at 1693.422 kb on + strand at 1693.526 kb on - strand at 1693.541 kb on - strand at 1693.541 kb on - strand, within Dsui_1610 at 1693.610 kb on + strand, within Dsui_1610 at 1693.638 kb on + strand, within Dsui_1610 at 1693.643 kb on + strand, within Dsui_1610 at 1693.643 kb on + strand, within Dsui_1610 at 1694.018 kb on - strand at 1694.071 kb on + strand at 1694.087 kb on + strand at 1694.087 kb on + strand at 1694.087 kb on + strand at 1694.087 kb on + strand at 1694.087 kb on + strand at 1694.087 kb on + strand at 1694.087 kb on + strand at 1694.087 kb on + strand at 1694.087 kb on + strand at 1694.087 kb on + strand at 1694.087 kb on + strand at 1694.095 kb on - strand at 1694.095 kb on - strand at 1694.131 kb on + strand at 1694.171 kb on + strand at 1694.189 kb on + strand at 1694.189 kb on + strand at 1694.189 kb on + strand at 1694.197 kb on - strand at 1694.207 kb on - strand at 1694.218 kb on + strand at 1694.234 kb on - strand at 1694.253 kb on + strand at 1694.261 kb on + strand at 1694.268 kb on + strand at 1694.295 kb on + strand at 1694.303 kb on - strand at 1694.305 kb on + strand at 1694.308 kb on - strand at 1694.308 kb on - strand at 1694.318 kb on - strand at 1694.350 kb on + strand at 1694.350 kb on + strand at 1694.350 kb on + strand at 1694.350 kb on + strand at 1694.358 kb on - strand at 1694.358 kb on - strand at 1694.418 kb on - strand at 1694.420 kb on + strand at 1694.454 kb on - strand at 1694.454 kb on - strand at 1694.462 kb on - strand at 1694.469 kb on + strand at 1694.479 kb on - strand at 1694.496 kb on - strand at 1694.501 kb on - strand at 1694.586 kb on + strand at 1694.586 kb on + strand at 1694.587 kb on - strand at 1694.593 kb on - strand at 1694.594 kb on - strand at 1694.594 kb on - strand at 1694.640 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cobalt chloride 0.25 mM remove 1,692,519 - +0.7 1,692,589 + -0.3 1,692,658 + +0.7 1,692,668 + +0.7 1,692,758 + -0.3 1,692,849 - Dsui_1609 0.15 -1.3 1,692,929 + Dsui_1609 0.28 -0.3 1,692,956 + Dsui_1609 0.33 +0.7 1,692,985 + Dsui_1609 0.37 -0.3 1,692,985 + Dsui_1609 0.37 +0.7 1,693,373 - -0.9 1,693,422 + +0.7 1,693,526 - -0.3 1,693,541 - +0.7 1,693,541 - Dsui_1610 0.18 -1.9 1,693,610 + Dsui_1610 0.48 -1.6 1,693,638 + Dsui_1610 0.61 -0.3 1,693,643 + Dsui_1610 0.63 +0.7 1,693,643 + Dsui_1610 0.63 -1.3 1,694,018 - +0.7 1,694,071 + -2.3 1,694,087 + +0.7 1,694,087 + -0.3 1,694,087 + -1.3 1,694,087 + -0.9 1,694,087 + -1.3 1,694,087 + +0.7 1,694,087 + +0.7 1,694,087 + -2.3 1,694,087 + +0.7 1,694,087 + -0.3 1,694,087 + -1.3 1,694,095 - -1.3 1,694,095 - -1.6 1,694,131 + -0.3 1,694,171 + -0.9 1,694,189 + -0.3 1,694,189 + +0.7 1,694,189 + -1.3 1,694,197 - -1.3 1,694,207 - -0.3 1,694,218 + -0.3 1,694,234 - -0.3 1,694,253 + -0.3 1,694,261 + +0.7 1,694,268 + +0.7 1,694,295 + -0.9 1,694,303 - -0.9 1,694,305 + -0.9 1,694,308 - -2.3 1,694,308 - +0.7 1,694,318 - -1.6 1,694,350 + -1.3 1,694,350 + -0.3 1,694,350 + -1.3 1,694,350 + -0.3 1,694,358 - +0.7 1,694,358 - -0.9 1,694,418 - +0.7 1,694,420 + +0.7 1,694,454 - +0.7 1,694,454 - -0.9 1,694,462 - -0.3 1,694,469 + +0.7 1,694,479 - -0.3 1,694,496 - +0.7 1,694,501 - -0.3 1,694,586 + -0.3 1,694,586 + -1.3 1,694,587 - -0.3 1,694,593 - -1.6 1,694,594 - +0.7 1,694,594 - -0.9 1,694,640 + -0.3
Or see this region's nucleotide sequence