Experiment: ALP with Cobalt chloride 0.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1448 and Dsui_1449 are separated by 233 nucleotides Dsui_1449 and Dsui_1450 are separated by 16 nucleotides Dsui_1450 and Dsui_1451 are separated by 22 nucleotides
Dsui_1448: Dsui_1448 - putative ornithine cyclodeaminase, mu-crystallin, at 1,503,277 to 1,504,248
_1448
Dsui_1449: Dsui_1449 - protein kinase family protein, at 1,504,482 to 1,506,998
_1449
Dsui_1450: Dsui_1450 - serine/threonine protein phosphatase, at 1,507,015 to 1,507,842
_1450
Dsui_1451: Dsui_1451 - FHA domain-containing protein, at 1,507,865 to 1,508,593
_1451
Position (kb)
1504
1505
1506
1507 Strain fitness (log2 ratio)
-2
-1
0
1 at 1503.492 kb on - strand, within Dsui_1448 at 1503.558 kb on - strand at 1503.761 kb on - strand, within Dsui_1448 at 1503.783 kb on + strand, within Dsui_1448 at 1503.847 kb on - strand, within Dsui_1448 at 1503.904 kb on - strand, within Dsui_1448 at 1503.910 kb on + strand, within Dsui_1448 at 1504.012 kb on + strand, within Dsui_1448 at 1504.187 kb on + strand at 1504.219 kb on - strand at 1504.337 kb on + strand at 1504.343 kb on - strand at 1504.343 kb on - strand at 1504.451 kb on + strand at 1504.492 kb on - strand at 1504.499 kb on + strand at 1504.618 kb on + strand at 1504.618 kb on + strand at 1504.742 kb on + strand, within Dsui_1449 at 1504.772 kb on - strand, within Dsui_1449 at 1504.794 kb on + strand, within Dsui_1449 at 1504.916 kb on - strand, within Dsui_1449 at 1505.044 kb on + strand, within Dsui_1449 at 1505.125 kb on - strand, within Dsui_1449 at 1505.128 kb on + strand, within Dsui_1449 at 1505.160 kb on + strand, within Dsui_1449 at 1505.311 kb on + strand, within Dsui_1449 at 1505.610 kb on - strand, within Dsui_1449 at 1505.723 kb on - strand, within Dsui_1449 at 1505.727 kb on + strand, within Dsui_1449 at 1505.776 kb on + strand, within Dsui_1449 at 1505.952 kb on + strand, within Dsui_1449 at 1506.061 kb on - strand at 1506.061 kb on - strand, within Dsui_1449 at 1506.121 kb on + strand, within Dsui_1449 at 1506.159 kb on - strand, within Dsui_1449 at 1506.188 kb on + strand, within Dsui_1449 at 1506.227 kb on + strand, within Dsui_1449 at 1506.257 kb on + strand, within Dsui_1449 at 1506.353 kb on + strand, within Dsui_1449 at 1506.419 kb on + strand, within Dsui_1449 at 1506.515 kb on + strand, within Dsui_1449 at 1506.518 kb on - strand, within Dsui_1449 at 1506.575 kb on - strand at 1506.583 kb on + strand, within Dsui_1449 at 1506.593 kb on + strand, within Dsui_1449 at 1506.696 kb on + strand, within Dsui_1449 at 1506.837 kb on - strand at 1506.837 kb on - strand at 1506.837 kb on - strand at 1506.837 kb on - strand at 1506.904 kb on - strand at 1506.904 kb on - strand at 1507.025 kb on + strand at 1507.547 kb on + strand, within Dsui_1450 at 1507.631 kb on + strand, within Dsui_1450 at 1507.855 kb on + strand at 1507.863 kb on - strand at 1507.969 kb on - strand, within Dsui_1451
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cobalt chloride 0.25 mM remove 1,503,492 - Dsui_1448 0.22 -0.9 1,503,558 - +0.7 1,503,761 - Dsui_1448 0.50 -2.5 1,503,783 + Dsui_1448 0.52 +1.7 1,503,847 - Dsui_1448 0.59 -1.7 1,503,904 - Dsui_1448 0.65 -0.9 1,503,910 + Dsui_1448 0.65 -1.4 1,504,012 + Dsui_1448 0.76 -0.7 1,504,187 + -2.5 1,504,219 - -2.7 1,504,337 + -0.2 1,504,343 - -0.3 1,504,343 - -2.3 1,504,451 + -0.8 1,504,492 - -0.3 1,504,499 + -1.1 1,504,618 + +0.3 1,504,618 + +0.9 1,504,742 + Dsui_1449 0.10 -1.3 1,504,772 - Dsui_1449 0.12 -1.3 1,504,794 + Dsui_1449 0.12 -1.0 1,504,916 - Dsui_1449 0.17 -0.9 1,505,044 + Dsui_1449 0.22 -0.3 1,505,125 - Dsui_1449 0.26 -1.9 1,505,128 + Dsui_1449 0.26 -0.8 1,505,160 + Dsui_1449 0.27 -0.3 1,505,311 + Dsui_1449 0.33 -1.0 1,505,610 - Dsui_1449 0.45 -0.3 1,505,723 - Dsui_1449 0.49 -0.3 1,505,727 + Dsui_1449 0.49 -1.7 1,505,776 + Dsui_1449 0.51 -1.1 1,505,952 + Dsui_1449 0.58 -0.5 1,506,061 - -0.3 1,506,061 - Dsui_1449 0.63 +0.7 1,506,121 + Dsui_1449 0.65 -1.3 1,506,159 - Dsui_1449 0.67 -0.9 1,506,188 + Dsui_1449 0.68 -0.1 1,506,227 + Dsui_1449 0.69 -2.7 1,506,257 + Dsui_1449 0.71 +0.8 1,506,353 + Dsui_1449 0.74 -1.5 1,506,419 + Dsui_1449 0.77 -1.8 1,506,515 + Dsui_1449 0.81 -0.4 1,506,518 - Dsui_1449 0.81 -0.3 1,506,575 - +0.7 1,506,583 + Dsui_1449 0.83 -0.3 1,506,593 + Dsui_1449 0.84 +0.7 1,506,696 + Dsui_1449 0.88 -0.6 1,506,837 - -1.9 1,506,837 - +0.7 1,506,837 - +0.7 1,506,837 - +0.7 1,506,904 - -1.3 1,506,904 - -1.7 1,507,025 + -1.6 1,507,547 + Dsui_1450 0.64 -1.7 1,507,631 + Dsui_1450 0.74 -1.7 1,507,855 + -0.0 1,507,863 - +0.7 1,507,969 - Dsui_1451 0.14 +0.7
Or see this region's nucleotide sequence