Strain Fitness in Dechlorosoma suillum PS around Dsui_1374

Experiment: ALP with Cobalt chloride 0.25 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_1373 and Dsui_1374 are separated by 218 nucleotidesDsui_1374 and Dsui_1375 are separated by 36 nucleotidesDsui_1375 and Dsui_1376 are separated by 131 nucleotides Dsui_1373: Dsui_1373 - ATP-dependent helicase HrpA, at 1,427,026 to 1,430,988 _1373 Dsui_1374: Dsui_1374 - Protein of unknown function (DUF540), at 1,431,207 to 1,431,974 _1374 Dsui_1375: Dsui_1375 - putative nuleotide-utilizing enzyme, moeA, at 1,432,011 to 1,432,799 _1375 Dsui_1376: Dsui_1376 - phasin family protein, at 1,432,931 to 1,433,488 _1376 Position (kb) 1431 1432Strain fitness (log2 ratio) -3 -2 -1 0 1at 1430.221 kb on - strand, within Dsui_1373at 1430.298 kb on - strand, within Dsui_1373at 1430.300 kb on + strand, within Dsui_1373at 1430.448 kb on + strand, within Dsui_1373at 1430.526 kb on + strand, within Dsui_1373at 1430.611 kb on + strandat 1430.631 kb on + strandat 1430.662 kb on + strandat 1430.679 kb on + strandat 1430.754 kb on + strandat 1430.808 kb on - strandat 1430.825 kb on + strandat 1430.981 kb on - strandat 1431.064 kb on + strandat 1431.072 kb on - strandat 1431.110 kb on + strandat 1431.151 kb on + strandat 1431.333 kb on - strand, within Dsui_1374at 1431.405 kb on - strand, within Dsui_1374at 1431.584 kb on - strand, within Dsui_1374at 1431.623 kb on - strand, within Dsui_1374at 1431.628 kb on - strand, within Dsui_1374at 1431.652 kb on + strand, within Dsui_1374at 1431.684 kb on + strand, within Dsui_1374at 1431.725 kb on - strand, within Dsui_1374at 1431.778 kb on - strand, within Dsui_1374at 1431.798 kb on + strand, within Dsui_1374at 1431.860 kb on + strand, within Dsui_1374at 1431.955 kb on + strandat 1432.008 kb on + strandat 1432.015 kb on - strandat 1432.035 kb on + strandat 1432.148 kb on - strandat 1432.388 kb on - strand, within Dsui_1375at 1432.424 kb on + strand, within Dsui_1375at 1432.430 kb on - strand, within Dsui_1375at 1432.448 kb on + strand, within Dsui_1375at 1432.503 kb on - strand, within Dsui_1375at 1432.517 kb on - strand, within Dsui_1375at 1432.636 kb on + strand, within Dsui_1375at 1432.823 kb on + strandat 1432.900 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction ALP with Cobalt chloride 0.25 mM
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1,430,221 - Dsui_1373 0.81 -0.4
1,430,298 - Dsui_1373 0.83 -0.4
1,430,300 + Dsui_1373 0.83 +0.2
1,430,448 + Dsui_1373 0.86 -1.2
1,430,526 + Dsui_1373 0.88 -0.9
1,430,611 + -1.2
1,430,631 + -0.5
1,430,662 + -0.4
1,430,679 + -1.5
1,430,754 + -1.1
1,430,808 - -0.4
1,430,825 + -0.7
1,430,981 - +0.6
1,431,064 + -0.8
1,431,072 - -2.0
1,431,110 + -0.7
1,431,151 + -0.3
1,431,333 - Dsui_1374 0.16 -0.4
1,431,405 - Dsui_1374 0.26 +0.6
1,431,584 - Dsui_1374 0.49 -1.4
1,431,623 - Dsui_1374 0.54 -0.4
1,431,628 - Dsui_1374 0.55 +0.6
1,431,652 + Dsui_1374 0.58 -0.1
1,431,684 + Dsui_1374 0.62 -0.6
1,431,725 - Dsui_1374 0.67 -1.0
1,431,778 - Dsui_1374 0.74 +0.6
1,431,798 + Dsui_1374 0.77 -0.2
1,431,860 + Dsui_1374 0.85 -1.1
1,431,955 + -0.8
1,432,008 + -0.3
1,432,015 - +0.6
1,432,035 + -3.7
1,432,148 - -0.4
1,432,388 - Dsui_1375 0.48 -1.7
1,432,424 + Dsui_1375 0.52 +0.1
1,432,430 - Dsui_1375 0.53 -2.0
1,432,448 + Dsui_1375 0.55 -0.3
1,432,503 - Dsui_1375 0.62 -0.4
1,432,517 - Dsui_1375 0.64 -1.0
1,432,636 + Dsui_1375 0.79 -1.5
1,432,823 + -0.1
1,432,900 - -0.0

Or see this region's nucleotide sequence