Experiment: ALP with Cobalt chloride 0.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1243 and Dsui_1244 are separated by 13 nucleotides Dsui_1244 and Dsui_1245 are separated by 167 nucleotides
Dsui_1243: Dsui_1243 - hypothetical protein, at 1,302,591 to 1,303,937
_1243
Dsui_1244: Dsui_1244 - Protein of unknown function (DUF560), at 1,303,951 to 1,305,273
_1244
Dsui_1245: Dsui_1245 - arginine/lysine/ornithine decarboxylase, at 1,305,441 to 1,307,681
_1245
Position (kb)
1303
1304
1305
1306 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1303.104 kb on - strand, within Dsui_1243 at 1303.109 kb on - strand, within Dsui_1243 at 1303.109 kb on - strand, within Dsui_1243 at 1303.111 kb on + strand, within Dsui_1243 at 1303.119 kb on - strand, within Dsui_1243 at 1303.119 kb on - strand, within Dsui_1243 at 1303.192 kb on + strand at 1303.200 kb on - strand, within Dsui_1243 at 1303.230 kb on + strand, within Dsui_1243 at 1303.335 kb on - strand, within Dsui_1243 at 1303.376 kb on + strand, within Dsui_1243 at 1303.411 kb on + strand at 1303.543 kb on - strand, within Dsui_1243 at 1303.603 kb on + strand, within Dsui_1243 at 1303.611 kb on - strand, within Dsui_1243 at 1303.625 kb on - strand, within Dsui_1243 at 1303.739 kb on + strand at 1303.914 kb on - strand at 1303.921 kb on - strand at 1303.946 kb on - strand at 1303.976 kb on - strand at 1304.018 kb on - strand at 1304.018 kb on - strand at 1304.019 kb on + strand at 1304.019 kb on - strand at 1304.025 kb on + strand at 1304.112 kb on - strand, within Dsui_1244 at 1304.162 kb on - strand, within Dsui_1244 at 1304.178 kb on - strand, within Dsui_1244 at 1304.288 kb on - strand, within Dsui_1244 at 1304.299 kb on + strand, within Dsui_1244 at 1304.434 kb on + strand, within Dsui_1244 at 1304.439 kb on + strand, within Dsui_1244 at 1304.495 kb on + strand, within Dsui_1244 at 1304.513 kb on + strand, within Dsui_1244 at 1304.644 kb on + strand, within Dsui_1244 at 1304.683 kb on + strand, within Dsui_1244 at 1304.753 kb on - strand, within Dsui_1244 at 1304.797 kb on + strand, within Dsui_1244 at 1304.904 kb on + strand, within Dsui_1244 at 1304.914 kb on - strand, within Dsui_1244 at 1304.958 kb on + strand, within Dsui_1244 at 1304.976 kb on - strand, within Dsui_1244 at 1304.992 kb on - strand, within Dsui_1244 at 1305.039 kb on - strand, within Dsui_1244 at 1305.068 kb on - strand, within Dsui_1244 at 1305.229 kb on + strand at 1305.233 kb on - strand at 1305.237 kb on - strand at 1305.247 kb on - strand at 1305.281 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cobalt chloride 0.25 mM remove 1,303,104 - Dsui_1243 0.38 -0.6 1,303,109 - Dsui_1243 0.38 +0.8 1,303,109 - Dsui_1243 0.38 -0.9 1,303,111 + Dsui_1243 0.39 -1.7 1,303,119 - Dsui_1243 0.39 +0.3 1,303,119 - Dsui_1243 0.39 -1.0 1,303,192 + +0.6 1,303,200 - Dsui_1243 0.45 -1.5 1,303,230 + Dsui_1243 0.47 -0.4 1,303,335 - Dsui_1243 0.55 -1.0 1,303,376 + Dsui_1243 0.58 -1.0 1,303,411 + +0.6 1,303,543 - Dsui_1243 0.71 -0.4 1,303,603 + Dsui_1243 0.75 +0.6 1,303,611 - Dsui_1243 0.76 -1.0 1,303,625 - Dsui_1243 0.77 -0.6 1,303,739 + +0.6 1,303,914 - -1.1 1,303,921 - -0.2 1,303,946 - -0.3 1,303,976 - -1.0 1,304,018 - -0.3 1,304,018 - -2.4 1,304,019 + -0.4 1,304,019 - -0.8 1,304,025 + -1.0 1,304,112 - Dsui_1244 0.12 -2.2 1,304,162 - Dsui_1244 0.16 -2.9 1,304,178 - Dsui_1244 0.17 -0.5 1,304,288 - Dsui_1244 0.25 -1.6 1,304,299 + Dsui_1244 0.26 +0.6 1,304,434 + Dsui_1244 0.37 -0.4 1,304,439 + Dsui_1244 0.37 +0.6 1,304,495 + Dsui_1244 0.41 -0.4 1,304,513 + Dsui_1244 0.42 -1.7 1,304,644 + Dsui_1244 0.52 +0.6 1,304,683 + Dsui_1244 0.55 -0.4 1,304,753 - Dsui_1244 0.61 -0.8 1,304,797 + Dsui_1244 0.64 +0.6 1,304,904 + Dsui_1244 0.72 +0.6 1,304,914 - Dsui_1244 0.73 -2.2 1,304,958 + Dsui_1244 0.76 -1.4 1,304,976 - Dsui_1244 0.77 -1.5 1,304,992 - Dsui_1244 0.79 -1.3 1,305,039 - Dsui_1244 0.82 -0.6 1,305,068 - Dsui_1244 0.84 -1.2 1,305,229 + -2.4 1,305,233 - +0.5 1,305,237 - -0.8 1,305,247 - -1.5 1,305,281 - -0.7
Or see this region's nucleotide sequence