Experiment: ALP with Cobalt chloride 0.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1074 and Dsui_1075 are separated by 19 nucleotides Dsui_1075 and Dsui_1076 are separated by 66 nucleotides
Dsui_1074: Dsui_1074 - heavy metal efflux pump, cobalt-zinc-cadmium, at 1,107,711 to 1,110,845
_1074
Dsui_1075: Dsui_1075 - hypothetical protein, at 1,110,865 to 1,111,266
_1075
Dsui_1076: Dsui_1076 - copper/silver-translocating P-type ATPase, at 1,111,333 to 1,113,615
_1076
Position (kb)
1110
1111
1112 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1109.866 kb on + strand, within Dsui_1074 at 1109.890 kb on + strand, within Dsui_1074 at 1109.934 kb on + strand, within Dsui_1074 at 1109.942 kb on - strand, within Dsui_1074 at 1109.942 kb on - strand, within Dsui_1074 at 1109.949 kb on + strand, within Dsui_1074 at 1110.009 kb on - strand, within Dsui_1074 at 1110.098 kb on + strand, within Dsui_1074 at 1110.106 kb on - strand, within Dsui_1074 at 1110.115 kb on - strand, within Dsui_1074 at 1110.154 kb on - strand, within Dsui_1074 at 1110.182 kb on + strand, within Dsui_1074 at 1110.258 kb on + strand, within Dsui_1074 at 1110.302 kb on + strand, within Dsui_1074 at 1110.302 kb on + strand, within Dsui_1074 at 1110.310 kb on - strand, within Dsui_1074 at 1110.315 kb on - strand, within Dsui_1074 at 1110.317 kb on + strand, within Dsui_1074 at 1110.319 kb on + strand, within Dsui_1074 at 1110.413 kb on + strand, within Dsui_1074 at 1110.413 kb on + strand, within Dsui_1074 at 1110.421 kb on - strand, within Dsui_1074 at 1110.421 kb on - strand, within Dsui_1074 at 1110.421 kb on - strand, within Dsui_1074 at 1110.422 kb on + strand, within Dsui_1074 at 1110.429 kb on - strand, within Dsui_1074 at 1110.430 kb on - strand, within Dsui_1074 at 1110.483 kb on - strand, within Dsui_1074 at 1110.524 kb on + strand, within Dsui_1074 at 1110.537 kb on - strand at 1110.549 kb on - strand at 1110.557 kb on - strand at 1110.559 kb on - strand at 1110.563 kb on + strand at 1110.591 kb on - strand at 1110.717 kb on - strand at 1110.769 kb on + strand at 1110.963 kb on - strand, within Dsui_1075 at 1110.970 kb on - strand, within Dsui_1075 at 1110.973 kb on + strand, within Dsui_1075 at 1111.024 kb on - strand, within Dsui_1075 at 1111.062 kb on + strand, within Dsui_1075 at 1111.070 kb on - strand, within Dsui_1075 at 1111.070 kb on - strand, within Dsui_1075 at 1111.106 kb on + strand, within Dsui_1075 at 1111.148 kb on - strand, within Dsui_1075 at 1111.239 kb on + strand at 1111.263 kb on - strand at 1111.287 kb on + strand at 1111.296 kb on + strand at 1111.296 kb on + strand at 1111.296 kb on + strand at 1111.304 kb on - strand at 1111.322 kb on - strand at 1111.333 kb on - strand at 1111.379 kb on + strand at 1111.507 kb on + strand at 1111.507 kb on + strand at 1111.507 kb on + strand at 1111.515 kb on - strand at 1111.515 kb on - strand at 1111.542 kb on + strand at 1111.599 kb on + strand, within Dsui_1076 at 1111.666 kb on - strand, within Dsui_1076 at 1111.682 kb on - strand, within Dsui_1076 at 1111.729 kb on + strand, within Dsui_1076 at 1111.749 kb on + strand, within Dsui_1076 at 1111.807 kb on - strand, within Dsui_1076 at 1111.817 kb on - strand, within Dsui_1076 at 1111.891 kb on + strand, within Dsui_1076 at 1111.894 kb on - strand, within Dsui_1076 at 1111.935 kb on - strand, within Dsui_1076 at 1111.945 kb on - strand, within Dsui_1076 at 1111.958 kb on + strand, within Dsui_1076 at 1112.025 kb on - strand, within Dsui_1076 at 1112.032 kb on - strand, within Dsui_1076 at 1112.042 kb on - strand, within Dsui_1076 at 1112.042 kb on - strand, within Dsui_1076 at 1112.095 kb on + strand, within Dsui_1076 at 1112.127 kb on + strand, within Dsui_1076 at 1112.129 kb on + strand, within Dsui_1076 at 1112.143 kb on - strand, within Dsui_1076 at 1112.171 kb on + strand, within Dsui_1076 at 1112.179 kb on - strand, within Dsui_1076 at 1112.255 kb on - strand, within Dsui_1076
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cobalt chloride 0.25 mM remove 1,109,866 + Dsui_1074 0.69 +2.3 1,109,890 + Dsui_1074 0.70 -0.3 1,109,934 + Dsui_1074 0.71 +0.7 1,109,942 - Dsui_1074 0.71 +0.7 1,109,942 - Dsui_1074 0.71 +0.7 1,109,949 + Dsui_1074 0.71 -3.3 1,110,009 - Dsui_1074 0.73 -0.6 1,110,098 + Dsui_1074 0.76 +0.7 1,110,106 - Dsui_1074 0.76 -1.3 1,110,115 - Dsui_1074 0.77 +0.7 1,110,154 - Dsui_1074 0.78 -0.9 1,110,182 + Dsui_1074 0.79 -2.3 1,110,258 + Dsui_1074 0.81 +0.7 1,110,302 + Dsui_1074 0.83 -0.0 1,110,302 + Dsui_1074 0.83 +0.7 1,110,310 - Dsui_1074 0.83 +0.7 1,110,315 - Dsui_1074 0.83 -1.3 1,110,317 + Dsui_1074 0.83 -1.6 1,110,319 + Dsui_1074 0.83 -0.9 1,110,413 + Dsui_1074 0.86 -0.3 1,110,413 + Dsui_1074 0.86 +0.7 1,110,421 - Dsui_1074 0.86 +0.7 1,110,421 - Dsui_1074 0.86 +0.7 1,110,421 - Dsui_1074 0.86 -1.6 1,110,422 + Dsui_1074 0.86 -0.9 1,110,429 - Dsui_1074 0.87 -0.3 1,110,430 - Dsui_1074 0.87 +0.7 1,110,483 - Dsui_1074 0.88 -1.3 1,110,524 + Dsui_1074 0.90 +0.7 1,110,537 - -0.3 1,110,549 - +0.7 1,110,557 - -0.3 1,110,559 - -3.1 1,110,563 + +2.7 1,110,591 - -2.1 1,110,717 - -0.3 1,110,769 + -2.1 1,110,963 - Dsui_1075 0.24 +0.7 1,110,970 - Dsui_1075 0.26 -0.3 1,110,973 + Dsui_1075 0.27 -1.6 1,111,024 - Dsui_1075 0.40 +0.7 1,111,062 + Dsui_1075 0.49 -3.6 1,111,070 - Dsui_1075 0.51 -0.9 1,111,070 - Dsui_1075 0.51 -0.3 1,111,106 + Dsui_1075 0.60 -1.9 1,111,148 - Dsui_1075 0.70 -0.3 1,111,239 + +0.7 1,111,263 - -0.9 1,111,287 + -1.6 1,111,296 + -1.6 1,111,296 + -0.3 1,111,296 + -0.9 1,111,304 - -1.6 1,111,322 - +0.7 1,111,333 - +0.7 1,111,379 + -0.9 1,111,507 + -0.0 1,111,507 + +0.7 1,111,507 + +0.7 1,111,515 - -1.6 1,111,515 - -0.3 1,111,542 + -1.1 1,111,599 + Dsui_1076 0.12 -0.3 1,111,666 - Dsui_1076 0.15 -0.9 1,111,682 - Dsui_1076 0.15 +0.7 1,111,729 + Dsui_1076 0.17 -2.3 1,111,749 + Dsui_1076 0.18 -0.7 1,111,807 - Dsui_1076 0.21 -0.3 1,111,817 - Dsui_1076 0.21 +0.7 1,111,891 + Dsui_1076 0.24 +2.3 1,111,894 - Dsui_1076 0.25 -0.3 1,111,935 - Dsui_1076 0.26 +0.7 1,111,945 - Dsui_1076 0.27 -0.9 1,111,958 + Dsui_1076 0.27 -3.0 1,112,025 - Dsui_1076 0.30 +0.7 1,112,032 - Dsui_1076 0.31 -1.3 1,112,042 - Dsui_1076 0.31 -0.3 1,112,042 - Dsui_1076 0.31 +0.7 1,112,095 + Dsui_1076 0.33 +0.7 1,112,127 + Dsui_1076 0.35 -0.3 1,112,129 + Dsui_1076 0.35 +0.7 1,112,143 - Dsui_1076 0.35 +0.7 1,112,171 + Dsui_1076 0.37 -0.9 1,112,179 - Dsui_1076 0.37 +0.7 1,112,255 - Dsui_1076 0.40 +0.7
Or see this region's nucleotide sequence