Experiment: ALP with Cobalt chloride 0.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0995 and Dsui_0996 are separated by 75 nucleotides Dsui_0996 and Dsui_0997 are separated by 366 nucleotides
Dsui_0995: Dsui_0995 - arabinose efflux permease family protein, at 1,020,976 to 1,022,196
_0995
Dsui_0996: Dsui_0996 - soluble lytic murein transglycosylase-like protein, at 1,022,272 to 1,022,979
_0996
Dsui_0997: Dsui_0997 - methyl-accepting chemotaxis protein, at 1,023,346 to 1,025,373
_0997
Position (kb)
1022
1023 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1021.389 kb on + strand, within Dsui_0995 at 1021.476 kb on - strand, within Dsui_0995 at 1021.640 kb on + strand, within Dsui_0995 at 1021.648 kb on - strand, within Dsui_0995 at 1021.648 kb on - strand at 1021.696 kb on - strand at 1021.811 kb on - strand, within Dsui_0995 at 1021.971 kb on - strand, within Dsui_0995 at 1022.011 kb on + strand, within Dsui_0995 at 1022.050 kb on + strand, within Dsui_0995 at 1022.123 kb on + strand at 1022.131 kb on - strand at 1022.159 kb on - strand at 1022.185 kb on + strand at 1022.239 kb on + strand at 1022.339 kb on + strand at 1022.344 kb on + strand, within Dsui_0996 at 1022.552 kb on + strand, within Dsui_0996 at 1022.643 kb on - strand, within Dsui_0996 at 1022.701 kb on + strand, within Dsui_0996 at 1022.701 kb on + strand, within Dsui_0996 at 1022.709 kb on - strand, within Dsui_0996 at 1022.901 kb on + strand, within Dsui_0996 at 1022.906 kb on + strand, within Dsui_0996 at 1022.909 kb on - strand at 1022.919 kb on - strand at 1023.015 kb on + strand at 1023.034 kb on - strand at 1023.121 kb on + strand at 1023.131 kb on + strand at 1023.132 kb on + strand at 1023.133 kb on + strand at 1023.141 kb on - strand at 1023.232 kb on + strand at 1023.232 kb on + strand at 1023.240 kb on - strand at 1023.341 kb on - strand at 1023.352 kb on - strand at 1023.392 kb on + strand at 1023.416 kb on + strand at 1023.424 kb on - strand at 1023.494 kb on + strand at 1023.502 kb on - strand at 1023.504 kb on + strand at 1023.651 kb on - strand, within Dsui_0997 at 1023.655 kb on + strand, within Dsui_0997 at 1023.663 kb on - strand, within Dsui_0997 at 1023.725 kb on - strand, within Dsui_0997 at 1023.963 kb on + strand, within Dsui_0997
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cobalt chloride 0.25 mM remove 1,021,389 + Dsui_0995 0.34 -0.1 1,021,476 - Dsui_0995 0.41 -0.7 1,021,640 + Dsui_0995 0.54 -0.0 1,021,648 - Dsui_0995 0.55 -1.7 1,021,648 - +0.3 1,021,696 - -1.2 1,021,811 - Dsui_0995 0.68 -1.3 1,021,971 - Dsui_0995 0.81 -0.3 1,022,011 + Dsui_0995 0.85 -0.6 1,022,050 + Dsui_0995 0.88 -0.2 1,022,123 + -0.7 1,022,131 - -1.0 1,022,159 - -0.3 1,022,185 + -0.0 1,022,239 + -0.7 1,022,339 + -1.4 1,022,344 + Dsui_0996 0.10 -0.2 1,022,552 + Dsui_0996 0.40 +0.8 1,022,643 - Dsui_0996 0.52 +0.3 1,022,701 + Dsui_0996 0.61 -0.2 1,022,701 + Dsui_0996 0.61 -0.7 1,022,709 - Dsui_0996 0.62 +0.1 1,022,901 + Dsui_0996 0.89 +0.8 1,022,906 + Dsui_0996 0.90 -0.2 1,022,909 - -0.3 1,022,919 - -0.2 1,023,015 + +0.8 1,023,034 - -0.2 1,023,121 + +0.8 1,023,131 + -1.5 1,023,132 + -2.6 1,023,133 + -1.7 1,023,141 - +0.2 1,023,232 + -0.2 1,023,232 + -1.2 1,023,240 - +0.8 1,023,341 - -1.2 1,023,352 - +1.3 1,023,392 + -3.5 1,023,416 + +0.8 1,023,424 - -0.9 1,023,494 + -1.0 1,023,502 - -0.7 1,023,504 + -0.2 1,023,651 - Dsui_0997 0.15 +0.3 1,023,655 + Dsui_0997 0.15 +0.8 1,023,663 - Dsui_0997 0.16 +0.5 1,023,725 - Dsui_0997 0.19 -0.4 1,023,963 + Dsui_0997 0.30 +0.8
Or see this region's nucleotide sequence