Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS17070 and BWI76_RS17075 are separated by 154 nucleotides BWI76_RS17075 and BWI76_RS17080 are separated by 117 nucleotides BWI76_RS17080 and BWI76_RS17085 are separated by 34 nucleotides
BWI76_RS17070: BWI76_RS17070 - phosphoenolpyruvate synthase regulatory protein, at 3,542,781 to 3,543,614
_RS17070
BWI76_RS17075: BWI76_RS17075 - 3-deoxy-7-phosphoheptulonate synthase, at 3,543,769 to 3,544,815
_RS17075
BWI76_RS17080: BWI76_RS17080 - hypothetical protein, at 3,544,933 to 3,545,160
_RS17080
BWI76_RS17085: BWI76_RS17085 - hypothetical protein, at 3,545,195 to 3,546,637
_RS17085
Position (kb)
3543
3544
3545 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3542.788 kb on + strand at 3542.788 kb on + strand at 3542.788 kb on + strand at 3542.788 kb on + strand at 3542.796 kb on - strand at 3542.796 kb on - strand at 3542.844 kb on + strand at 3542.844 kb on + strand at 3542.844 kb on + strand at 3542.877 kb on + strand, within BWI76_RS17070 at 3542.885 kb on + strand, within BWI76_RS17070 at 3542.890 kb on + strand, within BWI76_RS17070 at 3542.940 kb on + strand, within BWI76_RS17070 at 3543.189 kb on - strand, within BWI76_RS17070 at 3543.220 kb on + strand, within BWI76_RS17070 at 3543.539 kb on - strand at 3543.670 kb on + strand at 3543.910 kb on + strand, within BWI76_RS17075 at 3544.161 kb on + strand, within BWI76_RS17075 at 3544.279 kb on - strand, within BWI76_RS17075 at 3544.310 kb on - strand, within BWI76_RS17075 at 3544.444 kb on - strand, within BWI76_RS17075 at 3545.073 kb on - strand, within BWI76_RS17080 at 3545.109 kb on + strand, within BWI76_RS17080 at 3545.112 kb on - strand, within BWI76_RS17080 at 3545.117 kb on - strand, within BWI76_RS17080 at 3545.121 kb on + strand, within BWI76_RS17080 at 3545.122 kb on - strand, within BWI76_RS17080 at 3545.140 kb on + strand at 3545.180 kb on - strand at 3545.385 kb on - strand, within BWI76_RS17085 at 3545.420 kb on - strand, within BWI76_RS17085 at 3545.599 kb on - strand, within BWI76_RS17085
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 3,542,788 + -0.6 3,542,788 + -0.2 3,542,788 + +0.5 3,542,788 + +0.4 3,542,796 - -1.5 3,542,796 - +0.2 3,542,844 + -2.9 3,542,844 + -0.3 3,542,844 + +0.3 3,542,877 + BWI76_RS17070 0.12 -0.9 3,542,885 + BWI76_RS17070 0.12 -0.0 3,542,890 + BWI76_RS17070 0.13 +0.8 3,542,940 + BWI76_RS17070 0.19 -1.3 3,543,189 - BWI76_RS17070 0.49 -0.1 3,543,220 + BWI76_RS17070 0.53 -0.6 3,543,539 - +0.1 3,543,670 + +0.6 3,543,910 + BWI76_RS17075 0.13 -0.9 3,544,161 + BWI76_RS17075 0.37 +0.0 3,544,279 - BWI76_RS17075 0.49 -0.0 3,544,310 - BWI76_RS17075 0.52 +0.1 3,544,444 - BWI76_RS17075 0.64 -0.1 3,545,073 - BWI76_RS17080 0.61 +0.0 3,545,109 + BWI76_RS17080 0.77 +0.1 3,545,112 - BWI76_RS17080 0.79 -1.9 3,545,117 - BWI76_RS17080 0.81 -0.8 3,545,121 + BWI76_RS17080 0.82 -0.6 3,545,122 - BWI76_RS17080 0.83 +0.6 3,545,140 + -1.7 3,545,180 - -0.9 3,545,385 - BWI76_RS17085 0.13 +0.7 3,545,420 - BWI76_RS17085 0.16 -0.4 3,545,599 - BWI76_RS17085 0.28 -0.0
Or see this region's nucleotide sequence