Experiment: L-Malic (C) with ammonium chloride; anaerobic; 3 days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS14415 and AZOBR_RS14420 are separated by 124 nucleotides AZOBR_RS14420 and AZOBR_RS14425 overlap by 1 nucleotides
AZOBR_RS14415: AZOBR_RS14415 - hypothetical protein, at 5,916 to 6,731
_RS14415
AZOBR_RS14420: AZOBR_RS14420 - tRNA-dihydrouridine synthase, at 6,856 to 7,842
_RS14420
AZOBR_RS14425: AZOBR_RS14425 - ATPase, at 7,842 to 9,044
_RS14425
Position (kb) 6
7
8 Strain fitness (log2 ratio) -1
0
1
2 at 5.976 kb on + strand at 5.977 kb on - strand at 6.214 kb on - strand, within AZOBR_RS14415 at 6.330 kb on + strand, within AZOBR_RS14415 at 6.331 kb on - strand, within AZOBR_RS14415 at 6.331 kb on - strand, within AZOBR_RS14415 at 6.331 kb on - strand, within AZOBR_RS14415 at 6.528 kb on + strand, within AZOBR_RS14415 at 6.669 kb on + strand at 6.670 kb on - strand at 6.691 kb on - strand at 6.800 kb on - strand at 6.800 kb on - strand at 6.823 kb on + strand at 6.827 kb on + strand at 6.909 kb on + strand at 6.909 kb on + strand at 7.391 kb on - strand, within AZOBR_RS14420 at 7.391 kb on - strand, within AZOBR_RS14420 at 7.579 kb on + strand, within AZOBR_RS14420 at 7.579 kb on + strand, within AZOBR_RS14420 at 7.579 kb on + strand, within AZOBR_RS14420 at 7.580 kb on - strand, within AZOBR_RS14420 at 7.580 kb on - strand, within AZOBR_RS14420 at 7.580 kb on - strand, within AZOBR_RS14420 at 7.580 kb on - strand, within AZOBR_RS14420 at 7.648 kb on + strand, within AZOBR_RS14420 at 7.669 kb on + strand, within AZOBR_RS14420 at 8.004 kb on + strand, within AZOBR_RS14425 at 8.620 kb on - strand, within AZOBR_RS14425 at 8.707 kb on + strand, within AZOBR_RS14425 at 8.721 kb on + strand, within AZOBR_RS14425 at 8.722 kb on - strand, within AZOBR_RS14425
Per-strain Table
Position Strand Gene LocusTag Fraction L-Malic (C) with ammonium chloride; anaerobic; 3 days remove 5,976 + -0.9 5,977 - +0.9 6,214 - AZOBR_RS14415 0.37 +0.5 6,330 + AZOBR_RS14415 0.51 +0.6 6,331 - AZOBR_RS14415 0.51 -0.4 6,331 - AZOBR_RS14415 0.51 +0.7 6,331 - AZOBR_RS14415 0.51 -0.0 6,528 + AZOBR_RS14415 0.75 +0.5 6,669 + -0.9 6,670 - +0.5 6,691 - -0.5 6,800 - +0.8 6,800 - +2.0 6,823 + -1.6 6,827 + -1.0 6,909 + +0.9 6,909 + +0.8 7,391 - AZOBR_RS14420 0.54 +1.4 7,391 - AZOBR_RS14420 0.54 +0.7 7,579 + AZOBR_RS14420 0.73 +0.2 7,579 + AZOBR_RS14420 0.73 -0.5 7,579 + AZOBR_RS14420 0.73 +0.1 7,580 - AZOBR_RS14420 0.73 +1.6 7,580 - AZOBR_RS14420 0.73 +2.1 7,580 - AZOBR_RS14420 0.73 -0.9 7,580 - AZOBR_RS14420 0.73 +0.9 7,648 + AZOBR_RS14420 0.80 +0.5 7,669 + AZOBR_RS14420 0.82 +0.1 8,004 + AZOBR_RS14425 0.13 +1.3 8,620 - AZOBR_RS14425 0.65 +0.7 8,707 + AZOBR_RS14425 0.72 +1.5 8,721 + AZOBR_RS14425 0.73 +1.5 8,722 - AZOBR_RS14425 0.73 +1.0
Or see this region's nucleotide sequence