Experiment: L-Malic (C) with ammonium chloride; anaerobic; 3 days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS13460 and AZOBR_RS13465 are separated by 365 nucleotides AZOBR_RS13465 and AZOBR_RS13470 are separated by 118 nucleotides AZOBR_RS13470 and AZOBR_RS13475 are separated by 126 nucleotides
AZOBR_RS13460: AZOBR_RS13460 - putative resolvase, at 2,856,509 to 2,858,152
_RS13460
AZOBR_RS13465: AZOBR_RS13465 - tRNA-Ser, at 2,858,518 to 2,858,608
_RS13465
AZOBR_RS13470: AZOBR_RS13470 - alpha/beta hydrolase, at 2,858,727 to 2,859,530
_RS13470
AZOBR_RS13475: AZOBR_RS13475 - glycosyl transferase, at 2,859,657 to 2,860,814
_RS13475
Position (kb)
2858
2859
2860 Strain fitness (log2 ratio)
-2
-1
0
1 at 2857.989 kb on - strand at 2857.989 kb on - strand at 2857.989 kb on - strand at 2857.989 kb on - strand at 2857.989 kb on - strand at 2858.249 kb on + strand at 2858.249 kb on + strand at 2858.332 kb on + strand at 2858.333 kb on - strand at 2858.333 kb on - strand at 2858.430 kb on + strand at 2858.430 kb on + strand at 2858.430 kb on + strand at 2858.445 kb on - strand at 2858.445 kb on - strand at 2858.445 kb on - strand at 2858.446 kb on + strand at 2858.466 kb on + strand at 2859.007 kb on + strand, within AZOBR_RS13470 at 2859.007 kb on + strand, within AZOBR_RS13470 at 2859.007 kb on + strand, within AZOBR_RS13470 at 2859.008 kb on - strand, within AZOBR_RS13470 at 2859.010 kb on + strand, within AZOBR_RS13470 at 2859.010 kb on + strand, within AZOBR_RS13470 at 2859.010 kb on + strand, within AZOBR_RS13470 at 2859.010 kb on + strand, within AZOBR_RS13470 at 2859.010 kb on + strand, within AZOBR_RS13470 at 2859.010 kb on + strand, within AZOBR_RS13470 at 2859.010 kb on + strand, within AZOBR_RS13470 at 2859.010 kb on + strand, within AZOBR_RS13470 at 2859.011 kb on - strand, within AZOBR_RS13470 at 2859.011 kb on - strand, within AZOBR_RS13470 at 2859.011 kb on - strand, within AZOBR_RS13470 at 2859.011 kb on - strand, within AZOBR_RS13470 at 2859.011 kb on - strand, within AZOBR_RS13470 at 2859.011 kb on - strand, within AZOBR_RS13470 at 2859.449 kb on - strand, within AZOBR_RS13470 at 2859.453 kb on + strand at 2859.454 kb on - strand at 2859.454 kb on - strand at 2859.454 kb on - strand at 2859.454 kb on - strand at 2859.454 kb on - strand at 2859.454 kb on - strand at 2859.454 kb on - strand at 2859.454 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Malic (C) with ammonium chloride; anaerobic; 3 days remove 2,857,989 - -0.2 2,857,989 - -2.2 2,857,989 - +0.4 2,857,989 - +0.6 2,857,989 - -0.6 2,858,249 + -1.0 2,858,249 + +1.7 2,858,332 + -0.0 2,858,333 - -1.0 2,858,333 - -0.4 2,858,430 + -0.4 2,858,430 + -0.0 2,858,430 + +0.6 2,858,445 - +0.4 2,858,445 - -0.7 2,858,445 - -0.3 2,858,446 + -0.9 2,858,466 + +0.1 2,859,007 + AZOBR_RS13470 0.35 -0.0 2,859,007 + AZOBR_RS13470 0.35 +0.4 2,859,007 + AZOBR_RS13470 0.35 -0.5 2,859,008 - AZOBR_RS13470 0.35 +0.0 2,859,010 + AZOBR_RS13470 0.35 +1.3 2,859,010 + AZOBR_RS13470 0.35 -0.2 2,859,010 + AZOBR_RS13470 0.35 +0.2 2,859,010 + AZOBR_RS13470 0.35 -0.4 2,859,010 + AZOBR_RS13470 0.35 +0.6 2,859,010 + AZOBR_RS13470 0.35 -0.7 2,859,010 + AZOBR_RS13470 0.35 +1.4 2,859,010 + AZOBR_RS13470 0.35 +0.6 2,859,011 - AZOBR_RS13470 0.35 +1.2 2,859,011 - AZOBR_RS13470 0.35 +0.6 2,859,011 - AZOBR_RS13470 0.35 +1.2 2,859,011 - AZOBR_RS13470 0.35 +0.8 2,859,011 - AZOBR_RS13470 0.35 +0.1 2,859,011 - AZOBR_RS13470 0.35 +0.4 2,859,449 - AZOBR_RS13470 0.90 +0.4 2,859,453 + +0.4 2,859,454 - +0.3 2,859,454 - +0.0 2,859,454 - -0.6 2,859,454 - -0.3 2,859,454 - -0.6 2,859,454 - -0.9 2,859,454 - -0.1 2,859,454 - -0.4
Or see this region's nucleotide sequence