Experiment: L-Malic (C) with ammonium chloride; anaerobic; 3 days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS11790 and AZOBR_RS11795 are separated by 351 nucleotides
AZOBR_RS11790: AZOBR_RS11790 - hypothetical protein, at 2,471,469 to 2,472,083
_RS11790
AZOBR_RS11795: AZOBR_RS11795 - cupin, at 2,472,435 to 2,472,854
_RS11795
Position (kb)
2472
2473 Strain fitness (log2 ratio)
-1
0
1 at 2471.749 kb on + strand, within AZOBR_RS11790 at 2471.750 kb on - strand, within AZOBR_RS11790 at 2471.983 kb on + strand, within AZOBR_RS11790 at 2471.983 kb on + strand, within AZOBR_RS11790 at 2471.983 kb on + strand, within AZOBR_RS11790 at 2472.125 kb on - strand at 2472.125 kb on - strand at 2472.599 kb on - strand, within AZOBR_RS11795 at 2472.599 kb on - strand, within AZOBR_RS11795 at 2472.599 kb on - strand, within AZOBR_RS11795 at 2472.628 kb on + strand, within AZOBR_RS11795 at 2472.628 kb on + strand, within AZOBR_RS11795 at 2472.629 kb on - strand, within AZOBR_RS11795 at 2472.629 kb on - strand, within AZOBR_RS11795 at 2472.629 kb on - strand, within AZOBR_RS11795 at 2472.629 kb on - strand, within AZOBR_RS11795 at 2472.908 kb on + strand at 2472.908 kb on + strand at 2472.909 kb on - strand at 2472.909 kb on - strand at 2472.909 kb on - strand at 2472.963 kb on + strand at 2472.965 kb on + strand at 2472.965 kb on + strand at 2472.966 kb on - strand at 2472.966 kb on - strand at 2472.966 kb on - strand at 2473.326 kb on + strand at 2473.327 kb on - strand at 2473.327 kb on - strand at 2473.414 kb on - strand at 2473.414 kb on - strand at 2473.638 kb on + strand at 2473.638 kb on + strand at 2473.639 kb on - strand at 2473.639 kb on - strand at 2473.767 kb on + strand at 2473.768 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Malic (C) with ammonium chloride; anaerobic; 3 days remove 2,471,749 + AZOBR_RS11790 0.46 -0.6 2,471,750 - AZOBR_RS11790 0.46 +0.3 2,471,983 + AZOBR_RS11790 0.84 -0.6 2,471,983 + AZOBR_RS11790 0.84 +0.5 2,471,983 + AZOBR_RS11790 0.84 -0.6 2,472,125 - -1.2 2,472,125 - +0.2 2,472,599 - AZOBR_RS11795 0.39 +0.5 2,472,599 - AZOBR_RS11795 0.39 -0.4 2,472,599 - AZOBR_RS11795 0.39 +0.7 2,472,628 + AZOBR_RS11795 0.46 +0.5 2,472,628 + AZOBR_RS11795 0.46 +1.5 2,472,629 - AZOBR_RS11795 0.46 +0.2 2,472,629 - AZOBR_RS11795 0.46 +0.3 2,472,629 - AZOBR_RS11795 0.46 +0.6 2,472,629 - AZOBR_RS11795 0.46 +0.1 2,472,908 + -0.2 2,472,908 + -1.1 2,472,909 - +0.3 2,472,909 - -0.9 2,472,909 - -0.0 2,472,963 + -1.0 2,472,965 + -0.2 2,472,965 + -0.4 2,472,966 - +0.3 2,472,966 - -0.6 2,472,966 - -0.3 2,473,326 + +0.5 2,473,327 - -0.8 2,473,327 - +1.7 2,473,414 - -0.3 2,473,414 - +1.6 2,473,638 + -0.5 2,473,638 + +0.9 2,473,639 - -0.4 2,473,639 - +1.5 2,473,767 + -0.2 2,473,768 - +1.4
Or see this region's nucleotide sequence