Experiment: L-Malic (C) with ammonium chloride; anaerobic; 3 days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS09700 and AZOBR_RS09705 are separated by 132 nucleotides AZOBR_RS09705 and AZOBR_RS09710 are separated by 231 nucleotides AZOBR_RS09710 and AZOBR_RS09715 are separated by 187 nucleotides AZOBR_RS09715 and AZOBR_RS09720 are separated by 128 nucleotides
AZOBR_RS09700: AZOBR_RS09700 - tRNA-Val, at 2,033,754 to 2,033,828
_RS09700
AZOBR_RS09705: AZOBR_RS09705 - tRNA-Val, at 2,033,961 to 2,034,035
_RS09705
AZOBR_RS09710: AZOBR_RS09710 - sugar tyrosine-protein kinase, at 2,034,267 to 2,034,431
_RS09710
AZOBR_RS09715: AZOBR_RS09715 - pantoate--beta-alanine ligase, at 2,034,619 to 2,035,485
_RS09715
AZOBR_RS09720: AZOBR_RS09720 - succinate-semialdehyde dehdyrogenase, at 2,035,614 to 2,037,107
_RS09720
Position (kb)
2034
2035
2036 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2033.633 kb on + strand at 2033.803 kb on - strand, within AZOBR_RS09700 at 2033.803 kb on - strand, within AZOBR_RS09700 at 2033.816 kb on - strand, within AZOBR_RS09700 at 2033.865 kb on + strand at 2034.136 kb on + strand at 2034.200 kb on - strand at 2034.275 kb on + strand at 2034.571 kb on + strand at 2034.571 kb on + strand at 2034.910 kb on + strand, within AZOBR_RS09715 at 2034.911 kb on - strand, within AZOBR_RS09715 at 2034.934 kb on + strand, within AZOBR_RS09715 at 2034.935 kb on - strand, within AZOBR_RS09715 at 2035.207 kb on + strand, within AZOBR_RS09715 at 2035.208 kb on - strand, within AZOBR_RS09715 at 2035.357 kb on + strand, within AZOBR_RS09715 at 2035.559 kb on + strand at 2035.559 kb on + strand at 2035.559 kb on + strand at 2035.559 kb on + strand at 2035.560 kb on - strand at 2035.560 kb on - strand at 2035.560 kb on - strand at 2035.560 kb on - strand at 2035.560 kb on - strand at 2035.561 kb on + strand at 2035.561 kb on + strand at 2035.561 kb on + strand at 2035.562 kb on - strand at 2035.562 kb on - strand at 2035.620 kb on + strand at 2035.978 kb on - strand, within AZOBR_RS09720
Per-strain Table
Position Strand Gene LocusTag Fraction L-Malic (C) with ammonium chloride; anaerobic; 3 days remove 2,033,633 + +0.1 2,033,803 - AZOBR_RS09700 0.65 -0.0 2,033,803 - AZOBR_RS09700 0.65 -0.1 2,033,816 - AZOBR_RS09700 0.83 -2.4 2,033,865 + +0.8 2,034,136 + -0.7 2,034,200 - -0.4 2,034,275 + -4.4 2,034,571 + -0.3 2,034,571 + +0.8 2,034,910 + AZOBR_RS09715 0.34 +0.8 2,034,911 - AZOBR_RS09715 0.34 -0.9 2,034,934 + AZOBR_RS09715 0.36 -0.5 2,034,935 - AZOBR_RS09715 0.36 -0.1 2,035,207 + AZOBR_RS09715 0.68 +0.6 2,035,208 - AZOBR_RS09715 0.68 +0.1 2,035,357 + AZOBR_RS09715 0.85 +0.4 2,035,559 + -0.9 2,035,559 + -0.1 2,035,559 + -0.2 2,035,559 + +0.2 2,035,560 - +0.7 2,035,560 - -0.3 2,035,560 - +0.7 2,035,560 - -0.2 2,035,560 - +0.5 2,035,561 + -0.2 2,035,561 + +0.6 2,035,561 + -0.4 2,035,562 - -0.2 2,035,562 - -0.1 2,035,620 + +0.2 2,035,978 - AZOBR_RS09720 0.24 +0.5
Or see this region's nucleotide sequence