Experiment: L-Phenylalanine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_27935 and AO353_27940 are separated by 35 nucleotides AO353_27940 and AO353_27945 are separated by 23 nucleotides AO353_27945 and AO353_27950 overlap by 4 nucleotides AO353_27950 and AO353_27955 are separated by 12 nucleotides
AO353_27935: AO353_27935 - succinyl-CoA--3-ketoacid-CoA transferase, at 6,094,972 to 6,095,670
_27935
AO353_27940: AO353_27940 - succinyl-CoA--3-ketoacid-CoA transferase, at 6,095,706 to 6,096,365
_27940
AO353_27945: AO353_27945 - acetyl-CoA acetyltransferase, at 6,096,389 to 6,097,570
_27945
AO353_27950: AO353_27950 - hypothetical protein, at 6,097,567 to 6,097,878
_27950
AO353_27955: AO353_27955 - tyrosyl-trna synthetase, at 6,097,891 to 6,098,427
_27955
Position (kb)
6096
6097
6098 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 6095.480 kb on - strand at 6095.605 kb on + strand at 6095.605 kb on + strand at 6095.605 kb on + strand at 6095.605 kb on + strand at 6095.605 kb on + strand at 6095.605 kb on + strand at 6095.605 kb on + strand at 6095.605 kb on + strand at 6095.605 kb on + strand at 6095.606 kb on - strand at 6095.606 kb on - strand at 6095.606 kb on - strand at 6095.606 kb on - strand at 6095.606 kb on - strand at 6095.606 kb on - strand at 6095.606 kb on - strand at 6095.644 kb on - strand at 6095.714 kb on + strand at 6095.764 kb on - strand at 6095.766 kb on + strand at 6095.767 kb on - strand at 6095.767 kb on - strand at 6095.767 kb on - strand at 6095.767 kb on - strand at 6095.767 kb on - strand at 6095.808 kb on + strand, within AO353_27940 at 6095.808 kb on + strand, within AO353_27940 at 6095.808 kb on + strand, within AO353_27940 at 6095.808 kb on + strand, within AO353_27940 at 6095.808 kb on + strand, within AO353_27940 at 6095.808 kb on + strand, within AO353_27940 at 6095.808 kb on + strand, within AO353_27940 at 6095.808 kb on + strand, within AO353_27940 at 6095.808 kb on + strand, within AO353_27940 at 6095.809 kb on - strand, within AO353_27940 at 6095.809 kb on - strand, within AO353_27940 at 6095.809 kb on - strand, within AO353_27940 at 6095.885 kb on + strand, within AO353_27940 at 6096.031 kb on + strand, within AO353_27940 at 6096.032 kb on - strand, within AO353_27940 at 6096.032 kb on - strand, within AO353_27940 at 6096.032 kb on - strand, within AO353_27940 at 6096.174 kb on + strand, within AO353_27940 at 6096.175 kb on - strand, within AO353_27940 at 6096.234 kb on + strand, within AO353_27940 at 6096.320 kb on + strand at 6096.755 kb on + strand, within AO353_27945 at 6096.755 kb on + strand, within AO353_27945 at 6096.755 kb on + strand, within AO353_27945 at 6096.755 kb on + strand, within AO353_27945 at 6096.756 kb on - strand, within AO353_27945 at 6096.756 kb on - strand, within AO353_27945 at 6096.756 kb on - strand, within AO353_27945 at 6096.756 kb on - strand, within AO353_27945 at 6096.852 kb on - strand, within AO353_27945 at 6096.890 kb on + strand, within AO353_27945 at 6096.890 kb on + strand, within AO353_27945 at 6096.890 kb on + strand, within AO353_27945 at 6096.890 kb on + strand, within AO353_27945 at 6096.890 kb on + strand, within AO353_27945 at 6096.890 kb on + strand, within AO353_27945 at 6096.891 kb on - strand, within AO353_27945 at 6096.891 kb on - strand, within AO353_27945 at 6096.891 kb on - strand, within AO353_27945 at 6097.439 kb on - strand, within AO353_27945 at 6097.568 kb on + strand at 6097.705 kb on + strand, within AO353_27950 at 6097.777 kb on - strand, within AO353_27950 at 6098.154 kb on + strand, within AO353_27955 at 6098.154 kb on + strand, within AO353_27955 at 6098.154 kb on + strand, within AO353_27955 at 6098.154 kb on + strand, within AO353_27955 at 6098.154 kb on + strand, within AO353_27955 at 6098.154 kb on + strand, within AO353_27955 at 6098.154 kb on + strand, within AO353_27955 at 6098.154 kb on + strand, within AO353_27955 at 6098.154 kb on + strand, within AO353_27955 at 6098.154 kb on + strand, within AO353_27955 at 6098.154 kb on + strand, within AO353_27955 at 6098.154 kb on + strand, within AO353_27955 at 6098.155 kb on - strand, within AO353_27955 at 6098.155 kb on - strand, within AO353_27955 at 6098.155 kb on - strand, within AO353_27955 at 6098.210 kb on + strand, within AO353_27955 at 6098.210 kb on + strand, within AO353_27955 at 6098.210 kb on + strand, within AO353_27955 at 6098.210 kb on + strand, within AO353_27955 at 6098.211 kb on - strand, within AO353_27955 at 6098.211 kb on - strand, within AO353_27955 at 6098.211 kb on - strand, within AO353_27955 at 6098.211 kb on - strand, within AO353_27955 at 6098.211 kb on - strand, within AO353_27955 at 6098.220 kb on + strand, within AO353_27955 at 6098.221 kb on - strand, within AO353_27955 at 6098.455 kb on + strand at 6098.455 kb on + strand at 6098.455 kb on + strand at 6098.455 kb on + strand at 6098.456 kb on - strand at 6098.456 kb on - strand at 6098.456 kb on - strand at 6098.456 kb on - strand at 6098.456 kb on - strand at 6098.456 kb on - strand at 6098.456 kb on - strand at 6098.525 kb on - strand at 6098.538 kb on + strand at 6098.551 kb on + strand at 6098.551 kb on + strand at 6098.551 kb on + strand at 6098.551 kb on + strand at 6098.552 kb on - strand at 6098.552 kb on - strand at 6098.552 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine (C) remove 6,095,480 - -0.0 6,095,605 + -0.2 6,095,605 + -0.4 6,095,605 + -0.6 6,095,605 + +0.1 6,095,605 + +1.2 6,095,605 + -2.0 6,095,605 + -1.2 6,095,605 + -1.0 6,095,605 + +0.9 6,095,606 - -1.0 6,095,606 - -0.0 6,095,606 - +1.4 6,095,606 - -1.1 6,095,606 - -1.4 6,095,606 - +0.6 6,095,606 - -0.0 6,095,644 - -1.0 6,095,714 + -1.6 6,095,764 - -1.9 6,095,766 + -0.5 6,095,767 - +1.8 6,095,767 - -0.4 6,095,767 - -0.1 6,095,767 - -1.6 6,095,767 - +1.0 6,095,808 + AO353_27940 0.15 -0.6 6,095,808 + AO353_27940 0.15 +0.6 6,095,808 + AO353_27940 0.15 -2.7 6,095,808 + AO353_27940 0.15 -1.1 6,095,808 + AO353_27940 0.15 -0.7 6,095,808 + AO353_27940 0.15 -1.7 6,095,808 + AO353_27940 0.15 -0.0 6,095,808 + AO353_27940 0.15 -1.0 6,095,808 + AO353_27940 0.15 -0.6 6,095,809 - AO353_27940 0.16 -1.0 6,095,809 - AO353_27940 0.16 +0.6 6,095,809 - AO353_27940 0.16 +0.2 6,095,885 + AO353_27940 0.27 -1.8 6,096,031 + AO353_27940 0.49 +0.2 6,096,032 - AO353_27940 0.49 -1.3 6,096,032 - AO353_27940 0.49 -1.0 6,096,032 - AO353_27940 0.49 -1.0 6,096,174 + AO353_27940 0.71 -0.0 6,096,175 - AO353_27940 0.71 -1.6 6,096,234 + AO353_27940 0.80 -1.6 6,096,320 + -2.3 6,096,755 + AO353_27945 0.31 +0.6 6,096,755 + AO353_27945 0.31 -0.9 6,096,755 + AO353_27945 0.31 -0.5 6,096,755 + AO353_27945 0.31 -0.7 6,096,756 - AO353_27945 0.31 -0.4 6,096,756 - AO353_27945 0.31 +0.1 6,096,756 - AO353_27945 0.31 -1.4 6,096,756 - AO353_27945 0.31 +0.3 6,096,852 - AO353_27945 0.39 -0.0 6,096,890 + AO353_27945 0.42 -0.6 6,096,890 + AO353_27945 0.42 -0.3 6,096,890 + AO353_27945 0.42 +0.3 6,096,890 + AO353_27945 0.42 -0.9 6,096,890 + AO353_27945 0.42 +0.3 6,096,890 + AO353_27945 0.42 -1.6 6,096,891 - AO353_27945 0.42 -1.7 6,096,891 - AO353_27945 0.42 -0.0 6,096,891 - AO353_27945 0.42 -1.8 6,097,439 - AO353_27945 0.89 -0.9 6,097,568 + +0.3 6,097,705 + AO353_27950 0.44 +0.9 6,097,777 - AO353_27950 0.67 -1.2 6,098,154 + AO353_27955 0.49 +0.0 6,098,154 + AO353_27955 0.49 +0.0 6,098,154 + AO353_27955 0.49 -2.5 6,098,154 + AO353_27955 0.49 +0.9 6,098,154 + AO353_27955 0.49 -1.9 6,098,154 + AO353_27955 0.49 +0.2 6,098,154 + AO353_27955 0.49 +0.5 6,098,154 + AO353_27955 0.49 +1.9 6,098,154 + AO353_27955 0.49 -0.6 6,098,154 + AO353_27955 0.49 -2.3 6,098,154 + AO353_27955 0.49 +0.0 6,098,154 + AO353_27955 0.49 -0.8 6,098,155 - AO353_27955 0.49 +0.7 6,098,155 - AO353_27955 0.49 -0.8 6,098,155 - AO353_27955 0.49 -0.1 6,098,210 + AO353_27955 0.59 +0.3 6,098,210 + AO353_27955 0.59 +0.2 6,098,210 + AO353_27955 0.59 -0.6 6,098,210 + AO353_27955 0.59 +0.8 6,098,211 - AO353_27955 0.60 -0.1 6,098,211 - AO353_27955 0.60 -2.0 6,098,211 - AO353_27955 0.60 +0.5 6,098,211 - AO353_27955 0.60 -1.7 6,098,211 - AO353_27955 0.60 +0.6 6,098,220 + AO353_27955 0.61 -0.7 6,098,221 - AO353_27955 0.61 -0.2 6,098,455 + +0.8 6,098,455 + +0.5 6,098,455 + +1.3 6,098,455 + +0.6 6,098,456 - +1.2 6,098,456 - -1.0 6,098,456 - -0.4 6,098,456 - +0.1 6,098,456 - +1.5 6,098,456 - -0.8 6,098,456 - -0.6 6,098,525 - -0.9 6,098,538 + +0.5 6,098,551 + -2.9 6,098,551 + +2.3 6,098,551 + -0.1 6,098,551 + -2.1 6,098,552 - +2.6 6,098,552 - -0.6 6,098,552 - +1.2
Or see this region's nucleotide sequence