Experiment: L-Phenylalanine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_27850 and AO353_27855 overlap by 4 nucleotides AO353_27855 and AO353_27860 are separated by 281 nucleotides
AO353_27850: AO353_27850 - multidrug RND transporter, at 6,073,390 to 6,074,865
_27850
AO353_27855: AO353_27855 - MarR family transcriptional regulator, at 6,074,862 to 6,075,335
_27855
AO353_27860: AO353_27860 - hypothetical protein, at 6,075,617 to 6,079,288
_27860
Position (kb)
6074
6075
6076 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 6073.996 kb on + strand, within AO353_27850 at 6073.996 kb on + strand, within AO353_27850 at 6073.997 kb on - strand, within AO353_27850 at 6074.279 kb on + strand, within AO353_27850 at 6074.280 kb on - strand, within AO353_27850 at 6074.309 kb on + strand, within AO353_27850 at 6074.309 kb on + strand, within AO353_27850 at 6074.310 kb on - strand, within AO353_27850 at 6074.310 kb on - strand, within AO353_27850 at 6074.432 kb on + strand, within AO353_27850 at 6074.432 kb on + strand, within AO353_27850 at 6074.432 kb on + strand, within AO353_27850 at 6074.432 kb on + strand, within AO353_27850 at 6074.432 kb on + strand, within AO353_27850 at 6074.433 kb on - strand, within AO353_27850 at 6074.433 kb on - strand, within AO353_27850 at 6074.433 kb on - strand, within AO353_27850 at 6074.433 kb on - strand, within AO353_27850 at 6074.433 kb on - strand, within AO353_27850 at 6074.468 kb on + strand, within AO353_27850 at 6074.468 kb on + strand, within AO353_27850 at 6074.469 kb on - strand, within AO353_27850 at 6074.469 kb on - strand, within AO353_27850 at 6074.469 kb on - strand, within AO353_27850 at 6074.469 kb on - strand, within AO353_27850 at 6074.469 kb on - strand, within AO353_27850 at 6074.469 kb on - strand, within AO353_27850 at 6074.570 kb on + strand, within AO353_27850 at 6074.792 kb on + strand at 6074.792 kb on + strand at 6074.792 kb on + strand at 6074.793 kb on - strand at 6074.793 kb on - strand at 6074.793 kb on - strand at 6074.793 kb on - strand at 6074.793 kb on - strand at 6074.856 kb on + strand at 6074.997 kb on - strand, within AO353_27855 at 6075.040 kb on - strand, within AO353_27855 at 6075.048 kb on + strand, within AO353_27855 at 6075.348 kb on + strand at 6075.349 kb on - strand at 6075.369 kb on + strand at 6075.369 kb on + strand at 6075.370 kb on - strand at 6075.389 kb on + strand at 6075.412 kb on - strand at 6075.427 kb on + strand at 6075.438 kb on + strand at 6075.438 kb on + strand at 6075.438 kb on + strand at 6075.438 kb on + strand at 6075.439 kb on - strand at 6075.439 kb on - strand at 6075.439 kb on - strand at 6075.439 kb on - strand at 6075.451 kb on + strand at 6075.451 kb on + strand at 6075.451 kb on + strand at 6075.452 kb on - strand at 6075.452 kb on - strand at 6075.618 kb on + strand at 6075.618 kb on + strand at 6075.618 kb on + strand at 6075.618 kb on + strand at 6075.619 kb on - strand at 6075.619 kb on - strand at 6075.619 kb on - strand at 6075.633 kb on + strand at 6075.634 kb on - strand at 6075.634 kb on - strand at 6075.640 kb on + strand at 6075.679 kb on - strand at 6075.679 kb on - strand at 6075.700 kb on - strand at 6075.732 kb on - strand at 6075.960 kb on + strand at 6075.960 kb on + strand at 6075.960 kb on + strand at 6075.961 kb on - strand at 6075.961 kb on - strand at 6075.961 kb on - strand at 6075.961 kb on - strand at 6075.961 kb on - strand at 6076.089 kb on + strand, within AO353_27860 at 6076.153 kb on - strand, within AO353_27860
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine (C) remove 6,073,996 + AO353_27850 0.41 -0.6 6,073,996 + AO353_27850 0.41 -0.6 6,073,997 - AO353_27850 0.41 +0.9 6,074,279 + AO353_27850 0.60 -0.0 6,074,280 - AO353_27850 0.60 -1.3 6,074,309 + AO353_27850 0.62 +0.8 6,074,309 + AO353_27850 0.62 -1.3 6,074,310 - AO353_27850 0.62 -0.3 6,074,310 - AO353_27850 0.62 -1.2 6,074,432 + AO353_27850 0.71 +0.2 6,074,432 + AO353_27850 0.71 -0.1 6,074,432 + AO353_27850 0.71 -0.8 6,074,432 + AO353_27850 0.71 -1.7 6,074,432 + AO353_27850 0.71 +0.6 6,074,433 - AO353_27850 0.71 +0.7 6,074,433 - AO353_27850 0.71 +0.2 6,074,433 - AO353_27850 0.71 +0.7 6,074,433 - AO353_27850 0.71 +0.4 6,074,433 - AO353_27850 0.71 -1.2 6,074,468 + AO353_27850 0.73 +1.1 6,074,468 + AO353_27850 0.73 -0.0 6,074,469 - AO353_27850 0.73 -0.1 6,074,469 - AO353_27850 0.73 -1.3 6,074,469 - AO353_27850 0.73 +0.0 6,074,469 - AO353_27850 0.73 +0.1 6,074,469 - AO353_27850 0.73 -0.2 6,074,469 - AO353_27850 0.73 +0.1 6,074,570 + AO353_27850 0.80 -0.2 6,074,792 + -1.2 6,074,792 + -0.3 6,074,792 + +0.6 6,074,793 - +1.3 6,074,793 - -2.3 6,074,793 - -1.9 6,074,793 - -0.8 6,074,793 - -2.2 6,074,856 + +2.2 6,074,997 - AO353_27855 0.28 -1.7 6,075,040 - AO353_27855 0.38 -2.3 6,075,048 + AO353_27855 0.39 +0.6 6,075,348 + -0.5 6,075,349 - -3.0 6,075,369 + -1.1 6,075,369 + +0.2 6,075,370 - -0.1 6,075,389 + +0.4 6,075,412 - +0.5 6,075,427 + -2.3 6,075,438 + -0.8 6,075,438 + -0.2 6,075,438 + +1.1 6,075,438 + -1.3 6,075,439 - -1.5 6,075,439 - -0.4 6,075,439 - -1.3 6,075,439 - -0.6 6,075,451 + -0.2 6,075,451 + +0.7 6,075,451 + -0.8 6,075,452 - -0.1 6,075,452 - +0.2 6,075,618 + -2.1 6,075,618 + -0.6 6,075,618 + +0.7 6,075,618 + -0.4 6,075,619 - +0.8 6,075,619 - +1.0 6,075,619 - -0.9 6,075,633 + +0.1 6,075,634 - -2.2 6,075,634 - +0.6 6,075,640 + -1.6 6,075,679 - -1.8 6,075,679 - -1.1 6,075,700 - -0.2 6,075,732 - -0.4 6,075,960 + +0.5 6,075,960 + -0.8 6,075,960 + -1.1 6,075,961 - +1.3 6,075,961 - -1.1 6,075,961 - +0.4 6,075,961 - -1.2 6,075,961 - +0.3 6,076,089 + AO353_27860 0.13 -0.5 6,076,153 - AO353_27860 0.15 -0.6
Or see this region's nucleotide sequence