Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_27260

Experiment: L-Phenylalanine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO353_27255 and AO353_27260 are separated by 97 nucleotidesAO353_27260 and AO353_27265 overlap by 26 nucleotidesAO353_27265 and AO353_27270 are separated by 9 nucleotides AO353_27255: AO353_27255 - late control protein, at 5,960,924 to 5,961,970 _27255 AO353_27260: AO353_27260 - phage tail protein, at 5,962,068 to 5,962,274 _27260 AO353_27265: AO353_27265 - phage tail protein, at 5,962,249 to 5,963,094 _27265 AO353_27270: AO353_27270 - tail tape measure protein, at 5,963,104 to 5,965,953 _27270 Position (kb) 5962 5963Strain fitness (log2 ratio) -2 -1 0 1 2at 5961.069 kb on + strand, within AO353_27255at 5961.069 kb on + strand, within AO353_27255at 5961.069 kb on + strand, within AO353_27255at 5961.070 kb on - strand, within AO353_27255at 5961.070 kb on - strand, within AO353_27255at 5961.070 kb on - strand, within AO353_27255at 5961.106 kb on + strand, within AO353_27255at 5961.233 kb on - strand, within AO353_27255at 5961.233 kb on - strand, within AO353_27255at 5961.233 kb on - strand, within AO353_27255at 5961.233 kb on - strand, within AO353_27255at 5961.496 kb on - strand, within AO353_27255at 5961.524 kb on - strand, within AO353_27255at 5961.595 kb on + strand, within AO353_27255at 5961.789 kb on + strand, within AO353_27255at 5961.790 kb on - strand, within AO353_27255at 5962.082 kb on + strandat 5962.082 kb on + strandat 5962.082 kb on + strandat 5962.083 kb on - strandat 5962.083 kb on - strandat 5962.083 kb on - strandat 5962.213 kb on + strand, within AO353_27260at 5962.214 kb on - strand, within AO353_27260at 5962.351 kb on - strand, within AO353_27265at 5962.385 kb on + strand, within AO353_27265at 5962.450 kb on + strand, within AO353_27265at 5962.450 kb on + strand, within AO353_27265at 5962.451 kb on - strand, within AO353_27265at 5962.619 kb on + strand, within AO353_27265at 5962.619 kb on + strand, within AO353_27265at 5962.696 kb on - strand, within AO353_27265at 5962.822 kb on + strand, within AO353_27265at 5962.822 kb on + strand, within AO353_27265at 5962.822 kb on + strand, within AO353_27265at 5962.854 kb on - strand, within AO353_27265at 5962.894 kb on + strand, within AO353_27265at 5963.058 kb on - strandat 5963.085 kb on + strandat 5963.085 kb on + strandat 5963.085 kb on + strandat 5963.085 kb on + strandat 5963.085 kb on + strandat 5963.085 kb on + strandat 5963.086 kb on - strandat 5963.086 kb on - strandat 5963.086 kb on - strandat 5963.086 kb on - strandat 5963.086 kb on - strandat 5963.086 kb on - strandat 5963.086 kb on - strandat 5963.086 kb on - strandat 5963.086 kb on - strandat 5963.086 kb on - strandat 5963.086 kb on - strandat 5963.087 kb on + strandat 5963.087 kb on + strandat 5963.087 kb on + strandat 5963.087 kb on + strandat 5963.087 kb on + strandat 5963.087 kb on + strandat 5963.087 kb on + strandat 5963.087 kb on + strandat 5963.087 kb on + strandat 5963.087 kb on + strandat 5963.087 kb on + strandat 5963.088 kb on - strandat 5963.088 kb on - strandat 5963.088 kb on - strandat 5963.088 kb on - strandat 5963.088 kb on - strandat 5963.088 kb on - strandat 5963.088 kb on - strandat 5963.088 kb on - strandat 5963.088 kb on - strandat 5963.088 kb on - strandat 5963.088 kb on - strandat 5963.088 kb on - strandat 5963.105 kb on + strandat 5963.238 kb on + strandat 5963.238 kb on + strandat 5963.239 kb on - strandat 5963.250 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Phenylalanine (C)
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5,961,069 + AO353_27255 0.14 +0.7
5,961,069 + AO353_27255 0.14 -0.6
5,961,069 + AO353_27255 0.14 -0.9
5,961,070 - AO353_27255 0.14 +1.6
5,961,070 - AO353_27255 0.14 -1.2
5,961,070 - AO353_27255 0.14 -0.6
5,961,106 + AO353_27255 0.17 +1.0
5,961,233 - AO353_27255 0.30 +1.1
5,961,233 - AO353_27255 0.30 -0.0
5,961,233 - AO353_27255 0.30 -0.0
5,961,233 - AO353_27255 0.30 -0.4
5,961,496 - AO353_27255 0.55 -1.0
5,961,524 - AO353_27255 0.57 -0.5
5,961,595 + AO353_27255 0.64 -0.5
5,961,789 + AO353_27255 0.83 -1.0
5,961,790 - AO353_27255 0.83 -2.4
5,962,082 + -0.1
5,962,082 + -1.4
5,962,082 + +1.2
5,962,083 - +2.0
5,962,083 - -1.9
5,962,083 - -0.3
5,962,213 + AO353_27260 0.70 -0.4
5,962,214 - AO353_27260 0.71 -0.2
5,962,351 - AO353_27265 0.12 +0.9
5,962,385 + AO353_27265 0.16 -0.2
5,962,450 + AO353_27265 0.24 +0.8
5,962,450 + AO353_27265 0.24 -0.7
5,962,451 - AO353_27265 0.24 -0.8
5,962,619 + AO353_27265 0.44 -0.3
5,962,619 + AO353_27265 0.44 -0.5
5,962,696 - AO353_27265 0.53 +0.4
5,962,822 + AO353_27265 0.68 -0.4
5,962,822 + AO353_27265 0.68 +0.2
5,962,822 + AO353_27265 0.68 -1.6
5,962,854 - AO353_27265 0.72 -1.0
5,962,894 + AO353_27265 0.76 +2.0
5,963,058 - +0.2
5,963,085 + -0.3
5,963,085 + +0.7
5,963,085 + +2.1
5,963,085 + +2.2
5,963,085 + -0.9
5,963,085 + -0.6
5,963,086 - -2.0
5,963,086 - +0.7
5,963,086 - +1.0
5,963,086 - +0.7
5,963,086 - +0.7
5,963,086 - +0.7
5,963,086 - -0.8
5,963,086 - +0.6
5,963,086 - -2.7
5,963,086 - +0.1
5,963,086 - +0.6
5,963,087 + +0.3
5,963,087 + -0.8
5,963,087 + +1.0
5,963,087 + -1.8
5,963,087 + -0.7
5,963,087 + +0.1
5,963,087 + +1.1
5,963,087 + -0.7
5,963,087 + -1.0
5,963,087 + -0.9
5,963,087 + -0.7
5,963,088 - -0.0
5,963,088 - +1.9
5,963,088 - +0.7
5,963,088 - -1.7
5,963,088 - +0.3
5,963,088 - -0.0
5,963,088 - -0.0
5,963,088 - +0.6
5,963,088 - +0.7
5,963,088 - -0.3
5,963,088 - +0.5
5,963,088 - +0.1
5,963,105 + +0.2
5,963,238 + +0.4
5,963,238 + -1.8
5,963,239 - +0.4
5,963,250 - -2.1

Or see this region's nucleotide sequence