Experiment: L-Phenylalanine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_26920 and AO353_26925 are separated by 116 nucleotides AO353_26925 and AO353_26930 are separated by 250 nucleotides
AO353_26920: AO353_26920 - chemotaxis protein, at 5,903,107 to 5,903,988
_26920
AO353_26925: AO353_26925 - 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) <small>(from data)</small>, at 5,904,105 to 5,905,181
_26925
AO353_26930: AO353_26930 - multidrug transporter, at 5,905,432 to 5,906,382
_26930
Position (kb) 5904
5905
5906 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 5903.118 kb on + strand at 5903.119 kb on - strand at 5903.119 kb on - strand at 5903.119 kb on - strand at 5903.119 kb on - strand at 5903.119 kb on - strand at 5903.119 kb on - strand at 5903.119 kb on - strand at 5903.161 kb on + strand at 5903.161 kb on + strand at 5903.161 kb on + strand at 5903.161 kb on + strand at 5903.161 kb on + strand at 5903.161 kb on + strand at 5903.161 kb on + strand at 5903.162 kb on - strand at 5903.162 kb on - strand at 5903.162 kb on - strand at 5903.162 kb on - strand at 5903.162 kb on - strand at 5903.162 kb on - strand at 5903.167 kb on + strand at 5903.419 kb on + strand, within AO353_26920 at 5903.464 kb on + strand, within AO353_26920 at 5903.464 kb on + strand, within AO353_26920 at 5903.464 kb on + strand, within AO353_26920 at 5903.483 kb on - strand, within AO353_26920 at 5903.483 kb on - strand, within AO353_26920 at 5903.483 kb on - strand, within AO353_26920 at 5903.536 kb on + strand, within AO353_26920 at 5903.537 kb on - strand, within AO353_26920 at 5903.537 kb on - strand, within AO353_26920 at 5903.593 kb on + strand, within AO353_26920 at 5903.593 kb on + strand, within AO353_26920 at 5903.593 kb on + strand, within AO353_26920 at 5903.593 kb on + strand, within AO353_26920 at 5903.594 kb on - strand, within AO353_26920 at 5903.594 kb on - strand, within AO353_26920 at 5903.785 kb on + strand, within AO353_26920 at 5903.785 kb on + strand, within AO353_26920 at 5903.785 kb on + strand, within AO353_26920 at 5903.785 kb on + strand, within AO353_26920 at 5903.785 kb on + strand, within AO353_26920 at 5903.785 kb on + strand, within AO353_26920 at 5903.785 kb on + strand, within AO353_26920 at 5903.785 kb on + strand, within AO353_26920 at 5903.785 kb on + strand, within AO353_26920 at 5903.785 kb on + strand, within AO353_26920 at 5903.785 kb on + strand, within AO353_26920 at 5903.786 kb on - strand, within AO353_26920 at 5903.786 kb on - strand, within AO353_26920 at 5903.786 kb on - strand, within AO353_26920 at 5903.786 kb on - strand, within AO353_26920 at 5903.786 kb on - strand, within AO353_26920 at 5903.786 kb on - strand, within AO353_26920 at 5903.786 kb on - strand, within AO353_26920 at 5903.786 kb on - strand, within AO353_26920 at 5903.786 kb on - strand, within AO353_26920 at 5903.886 kb on + strand, within AO353_26920 at 5903.886 kb on + strand, within AO353_26920 at 5903.886 kb on + strand, within AO353_26920 at 5903.886 kb on + strand, within AO353_26920 at 5903.886 kb on + strand, within AO353_26920 at 5903.887 kb on - strand, within AO353_26920 at 5903.887 kb on - strand, within AO353_26920 at 5903.887 kb on - strand, within AO353_26920 at 5903.911 kb on + strand at 5903.911 kb on + strand at 5903.911 kb on + strand at 5903.911 kb on + strand at 5903.912 kb on - strand at 5904.082 kb on + strand at 5904.082 kb on + strand at 5904.082 kb on + strand at 5904.083 kb on - strand at 5904.091 kb on - strand at 5904.091 kb on - strand at 5904.200 kb on + strand at 5904.201 kb on - strand at 5904.201 kb on - strand at 5904.367 kb on + strand, within AO353_26925 at 5904.368 kb on - strand, within AO353_26925 at 5904.370 kb on + strand, within AO353_26925 at 5904.370 kb on + strand, within AO353_26925 at 5904.370 kb on + strand, within AO353_26925 at 5904.371 kb on - strand, within AO353_26925 at 5904.371 kb on - strand, within AO353_26925 at 5904.592 kb on + strand, within AO353_26925 at 5904.592 kb on + strand, within AO353_26925 at 5904.593 kb on - strand, within AO353_26925 at 5904.593 kb on - strand, within AO353_26925 at 5904.593 kb on - strand, within AO353_26925 at 5904.593 kb on - strand, within AO353_26925 at 5904.613 kb on + strand at 5904.614 kb on - strand, within AO353_26925 at 5904.662 kb on - strand, within AO353_26925 at 5904.668 kb on + strand, within AO353_26925 at 5904.680 kb on - strand, within AO353_26925 at 5904.686 kb on + strand at 5904.769 kb on + strand, within AO353_26925 at 5904.770 kb on - strand, within AO353_26925 at 5904.770 kb on - strand, within AO353_26925 at 5904.770 kb on - strand, within AO353_26925 at 5904.805 kb on + strand, within AO353_26925 at 5904.806 kb on - strand, within AO353_26925 at 5904.907 kb on + strand, within AO353_26925 at 5904.908 kb on - strand, within AO353_26925 at 5904.908 kb on - strand, within AO353_26925 at 5904.977 kb on - strand, within AO353_26925 at 5905.170 kb on + strand at 5905.170 kb on + strand at 5905.171 kb on - strand at 5905.171 kb on - strand at 5905.224 kb on + strand at 5905.224 kb on + strand at 5905.225 kb on - strand at 5905.225 kb on - strand at 5905.228 kb on + strand at 5905.228 kb on + strand at 5905.228 kb on + strand at 5905.228 kb on + strand at 5905.228 kb on + strand at 5905.229 kb on - strand at 5905.229 kb on - strand at 5905.229 kb on - strand at 5905.268 kb on - strand at 5905.268 kb on - strand at 5905.299 kb on + strand at 5905.299 kb on + strand at 5905.299 kb on + strand at 5905.300 kb on - strand at 5905.300 kb on - strand at 5905.319 kb on + strand at 5905.319 kb on + strand at 5905.319 kb on + strand at 5905.320 kb on - strand at 5905.377 kb on - strand at 5905.382 kb on + strand at 5905.383 kb on - strand at 5905.383 kb on - strand at 5905.383 kb on - strand at 5905.383 kb on - strand at 5905.383 kb on - strand at 5905.383 kb on - strand at 5905.383 kb on - strand at 5905.384 kb on + strand at 5905.385 kb on - strand at 5905.385 kb on - strand at 5905.385 kb on - strand at 5905.402 kb on - strand at 5905.435 kb on + strand at 5905.435 kb on + strand at 5905.436 kb on - strand at 5905.436 kb on - strand at 5905.470 kb on + strand at 5905.471 kb on - strand at 5905.481 kb on + strand at 5905.481 kb on + strand at 5905.481 kb on + strand at 5905.482 kb on - strand at 5905.482 kb on - strand at 5905.482 kb on - strand at 5905.482 kb on - strand at 5905.482 kb on - strand at 5905.482 kb on - strand at 5905.514 kb on + strand at 5905.514 kb on + strand at 5905.514 kb on + strand at 5905.515 kb on - strand at 5905.515 kb on - strand at 5905.515 kb on - strand at 5905.515 kb on - strand at 5905.515 kb on - strand at 5905.515 kb on - strand at 5905.515 kb on - strand at 5905.515 kb on - strand at 5905.515 kb on - strand at 5905.558 kb on + strand, within AO353_26930 at 5905.559 kb on - strand, within AO353_26930 at 5905.559 kb on - strand, within AO353_26930 at 5905.559 kb on - strand, within AO353_26930 at 5905.559 kb on - strand, within AO353_26930 at 5905.617 kb on + strand, within AO353_26930 at 5905.617 kb on + strand, within AO353_26930 at 5905.623 kb on + strand, within AO353_26930 at 5905.631 kb on + strand, within AO353_26930 at 5905.631 kb on + strand, within AO353_26930 at 5905.631 kb on + strand, within AO353_26930 at 5905.631 kb on + strand, within AO353_26930 at 5905.631 kb on + strand, within AO353_26930 at 5905.632 kb on - strand, within AO353_26930 at 5905.643 kb on + strand, within AO353_26930 at 5905.643 kb on + strand, within AO353_26930 at 5905.644 kb on - strand, within AO353_26930 at 5905.644 kb on - strand, within AO353_26930 at 5905.673 kb on + strand, within AO353_26930 at 5905.673 kb on + strand, within AO353_26930 at 5905.673 kb on + strand, within AO353_26930 at 5905.674 kb on - strand, within AO353_26930 at 5905.674 kb on - strand, within AO353_26930 at 5905.785 kb on - strand, within AO353_26930 at 5905.795 kb on - strand, within AO353_26930 at 5905.842 kb on - strand, within AO353_26930 at 5905.842 kb on - strand, within AO353_26930 at 5905.842 kb on - strand, within AO353_26930 at 5906.081 kb on + strand, within AO353_26930 at 5906.081 kb on + strand, within AO353_26930 at 5906.081 kb on + strand, within AO353_26930 at 5906.081 kb on + strand, within AO353_26930 at 5906.081 kb on + strand, within AO353_26930 at 5906.082 kb on - strand, within AO353_26930 at 5906.082 kb on - strand, within AO353_26930 at 5906.093 kb on + strand, within AO353_26930 at 5906.111 kb on + strand, within AO353_26930 at 5906.111 kb on + strand, within AO353_26930 at 5906.112 kb on - strand, within AO353_26930
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine (C) remove 5,903,118 + +0.1 5,903,119 - -0.2 5,903,119 - -0.9 5,903,119 - +0.4 5,903,119 - -0.1 5,903,119 - +0.5 5,903,119 - -0.7 5,903,119 - -0.1 5,903,161 + -1.5 5,903,161 + -0.9 5,903,161 + +0.6 5,903,161 + -1.8 5,903,161 + -0.1 5,903,161 + -1.6 5,903,161 + +0.0 5,903,162 - +0.8 5,903,162 - +0.7 5,903,162 - -1.5 5,903,162 - -0.7 5,903,162 - -0.3 5,903,162 - -1.9 5,903,167 + -1.2 5,903,419 + AO353_26920 0.35 +0.1 5,903,464 + AO353_26920 0.40 -0.1 5,903,464 + AO353_26920 0.40 -1.3 5,903,464 + AO353_26920 0.40 -2.0 5,903,483 - AO353_26920 0.43 -1.9 5,903,483 - AO353_26920 0.43 +0.3 5,903,483 - AO353_26920 0.43 +0.5 5,903,536 + AO353_26920 0.49 +1.7 5,903,537 - AO353_26920 0.49 +1.2 5,903,537 - AO353_26920 0.49 +0.5 5,903,593 + AO353_26920 0.55 +0.3 5,903,593 + AO353_26920 0.55 -0.8 5,903,593 + AO353_26920 0.55 -0.5 5,903,593 + AO353_26920 0.55 -0.9 5,903,594 - AO353_26920 0.55 +0.5 5,903,594 - AO353_26920 0.55 -2.0 5,903,785 + AO353_26920 0.77 +0.7 5,903,785 + AO353_26920 0.77 -0.6 5,903,785 + AO353_26920 0.77 +1.1 5,903,785 + AO353_26920 0.77 +0.5 5,903,785 + AO353_26920 0.77 -0.9 5,903,785 + AO353_26920 0.77 -1.2 5,903,785 + AO353_26920 0.77 -0.9 5,903,785 + AO353_26920 0.77 -0.9 5,903,785 + AO353_26920 0.77 -0.6 5,903,785 + AO353_26920 0.77 -0.0 5,903,785 + AO353_26920 0.77 -1.0 5,903,786 - AO353_26920 0.77 -0.3 5,903,786 - AO353_26920 0.77 +0.5 5,903,786 - AO353_26920 0.77 +0.6 5,903,786 - AO353_26920 0.77 +0.2 5,903,786 - AO353_26920 0.77 +0.1 5,903,786 - AO353_26920 0.77 -1.6 5,903,786 - AO353_26920 0.77 -0.3 5,903,786 - AO353_26920 0.77 -0.7 5,903,786 - AO353_26920 0.77 +0.7 5,903,886 + AO353_26920 0.88 +0.9 5,903,886 + AO353_26920 0.88 -0.2 5,903,886 + AO353_26920 0.88 -1.2 5,903,886 + AO353_26920 0.88 -1.3 5,903,886 + AO353_26920 0.88 +0.1 5,903,887 - AO353_26920 0.88 +0.1 5,903,887 - AO353_26920 0.88 -1.2 5,903,887 - AO353_26920 0.88 -0.7 5,903,911 + +0.0 5,903,911 + -1.5 5,903,911 + +1.2 5,903,911 + +0.3 5,903,912 - -1.2 5,904,082 + -0.6 5,904,082 + -1.8 5,904,082 + -0.1 5,904,083 - -1.9 5,904,091 - -1.2 5,904,091 - -0.6 5,904,200 + -2.1 5,904,201 - -2.4 5,904,201 - -0.6 5,904,367 + AO353_26925 0.24 -1.5 5,904,368 - AO353_26925 0.24 -0.8 5,904,370 + AO353_26925 0.25 -2.5 5,904,370 + AO353_26925 0.25 -1.7 5,904,370 + AO353_26925 0.25 -0.3 5,904,371 - AO353_26925 0.25 -2.6 5,904,371 - AO353_26925 0.25 -0.0 5,904,592 + AO353_26925 0.45 -2.5 5,904,592 + AO353_26925 0.45 -2.9 5,904,593 - AO353_26925 0.45 -2.0 5,904,593 - AO353_26925 0.45 -1.6 5,904,593 - AO353_26925 0.45 -2.1 5,904,593 - AO353_26925 0.45 -0.3 5,904,613 + -0.3 5,904,614 - AO353_26925 0.47 -1.9 5,904,662 - AO353_26925 0.52 -1.2 5,904,668 + AO353_26925 0.52 -1.6 5,904,680 - AO353_26925 0.53 -0.3 5,904,686 + -0.5 5,904,769 + AO353_26925 0.62 -1.9 5,904,770 - AO353_26925 0.62 -1.7 5,904,770 - AO353_26925 0.62 -1.0 5,904,770 - AO353_26925 0.62 -1.9 5,904,805 + AO353_26925 0.65 -1.5 5,904,806 - AO353_26925 0.65 -1.2 5,904,907 + AO353_26925 0.74 -0.8 5,904,908 - AO353_26925 0.75 -0.6 5,904,908 - AO353_26925 0.75 -2.9 5,904,977 - AO353_26925 0.81 -1.9 5,905,170 + -1.9 5,905,170 + +0.2 5,905,171 - -1.2 5,905,171 - -2.0 5,905,224 + -0.8 5,905,224 + -1.9 5,905,225 - +1.0 5,905,225 - -0.8 5,905,228 + -2.2 5,905,228 + -2.1 5,905,228 + +1.0 5,905,228 + -1.6 5,905,228 + -1.3 5,905,229 - -1.0 5,905,229 - -1.5 5,905,229 - +0.2 5,905,268 - -2.1 5,905,268 - -0.5 5,905,299 + -2.1 5,905,299 + +0.2 5,905,299 + -1.6 5,905,300 - +0.2 5,905,300 - -0.8 5,905,319 + -1.4 5,905,319 + -0.6 5,905,319 + -3.0 5,905,320 - -0.6 5,905,377 - -1.0 5,905,382 + -0.8 5,905,383 - -1.5 5,905,383 - -0.5 5,905,383 - -0.2 5,905,383 - +1.5 5,905,383 - +1.7 5,905,383 - -0.2 5,905,383 - -0.4 5,905,384 + -0.6 5,905,385 - +0.1 5,905,385 - +1.5 5,905,385 - -0.2 5,905,402 - -2.2 5,905,435 + -1.3 5,905,435 + -0.6 5,905,436 - -0.0 5,905,436 - -0.5 5,905,470 + +0.5 5,905,471 - -0.5 5,905,481 + -1.7 5,905,481 + -1.7 5,905,481 + -2.3 5,905,482 - +0.7 5,905,482 - +0.7 5,905,482 - -1.7 5,905,482 - +1.2 5,905,482 - -0.5 5,905,482 - -1.0 5,905,514 + -1.3 5,905,514 + -0.6 5,905,514 + -0.8 5,905,515 - +0.4 5,905,515 - -1.3 5,905,515 - +0.7 5,905,515 - -1.2 5,905,515 - +0.7 5,905,515 - +0.4 5,905,515 - -1.0 5,905,515 - -1.4 5,905,515 - -1.5 5,905,558 + AO353_26930 0.13 -0.3 5,905,559 - AO353_26930 0.13 -1.3 5,905,559 - AO353_26930 0.13 -0.9 5,905,559 - AO353_26930 0.13 +0.6 5,905,559 - AO353_26930 0.13 +0.3 5,905,617 + AO353_26930 0.19 +0.3 5,905,617 + AO353_26930 0.19 -1.1 5,905,623 + AO353_26930 0.20 -1.4 5,905,631 + AO353_26930 0.21 +1.3 5,905,631 + AO353_26930 0.21 -1.6 5,905,631 + AO353_26930 0.21 -0.8 5,905,631 + AO353_26930 0.21 -0.0 5,905,631 + AO353_26930 0.21 -2.0 5,905,632 - AO353_26930 0.21 -0.6 5,905,643 + AO353_26930 0.22 -0.9 5,905,643 + AO353_26930 0.22 +1.0 5,905,644 - AO353_26930 0.22 +0.8 5,905,644 - AO353_26930 0.22 -0.0 5,905,673 + AO353_26930 0.25 -0.4 5,905,673 + AO353_26930 0.25 -2.0 5,905,673 + AO353_26930 0.25 -0.5 5,905,674 - AO353_26930 0.25 +0.2 5,905,674 - AO353_26930 0.25 +0.4 5,905,785 - AO353_26930 0.37 -0.5 5,905,795 - AO353_26930 0.38 -0.8 5,905,842 - AO353_26930 0.43 +0.2 5,905,842 - AO353_26930 0.43 -0.9 5,905,842 - AO353_26930 0.43 +1.0 5,906,081 + AO353_26930 0.68 -0.5 5,906,081 + AO353_26930 0.68 -1.6 5,906,081 + AO353_26930 0.68 -0.0 5,906,081 + AO353_26930 0.68 -0.6 5,906,081 + AO353_26930 0.68 -1.0 5,906,082 - AO353_26930 0.68 +1.1 5,906,082 - AO353_26930 0.68 +0.0 5,906,093 + AO353_26930 0.70 -2.2 5,906,111 + AO353_26930 0.71 +0.2 5,906,111 + AO353_26930 0.71 +0.8 5,906,112 - AO353_26930 0.72 -1.0
Or see this region's nucleotide sequence