Experiment: L-Phenylalanine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_26650 and AO353_26655 are separated by 316 nucleotides AO353_26655 and AO353_26660 are separated by 56 nucleotides
AO353_26650: AO353_26650 - dihydrolipoamide dehydrogenase, at 5,835,117 to 5,836,502
_26650
AO353_26655: AO353_26655 - branched-chain amino acid aminotransferase, at 5,836,819 to 5,837,838
_26655
AO353_26660: AO353_26660 - LysR family transcriptional regulator, at 5,837,895 to 5,838,788
_26660
Position (kb)
5836
5837
5838 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 5835.848 kb on + strand, within AO353_26650 at 5835.924 kb on - strand at 5836.177 kb on + strand, within AO353_26650 at 5836.177 kb on + strand, within AO353_26650 at 5836.184 kb on + strand, within AO353_26650 at 5836.492 kb on + strand at 5836.492 kb on + strand at 5836.492 kb on + strand at 5836.492 kb on + strand at 5836.493 kb on - strand at 5836.493 kb on - strand at 5836.580 kb on + strand at 5836.580 kb on + strand at 5836.601 kb on - strand at 5836.712 kb on + strand at 5836.729 kb on + strand at 5836.745 kb on + strand at 5836.745 kb on + strand at 5836.745 kb on + strand at 5836.745 kb on + strand at 5836.745 kb on + strand at 5836.745 kb on + strand at 5836.745 kb on + strand at 5836.745 kb on + strand at 5836.745 kb on + strand at 5836.745 kb on + strand at 5836.746 kb on - strand at 5836.746 kb on - strand at 5836.746 kb on - strand at 5836.746 kb on - strand at 5836.746 kb on - strand at 5836.746 kb on - strand at 5836.746 kb on - strand at 5836.746 kb on - strand at 5836.746 kb on - strand at 5836.801 kb on + strand at 5836.802 kb on - strand at 5836.808 kb on + strand at 5836.861 kb on + strand at 5836.861 kb on + strand at 5836.862 kb on - strand at 5836.862 kb on - strand at 5836.862 kb on - strand at 5836.862 kb on - strand at 5836.882 kb on + strand at 5836.883 kb on - strand at 5836.883 kb on - strand at 5836.883 kb on - strand at 5836.975 kb on + strand, within AO353_26655 at 5837.191 kb on + strand, within AO353_26655 at 5837.191 kb on + strand, within AO353_26655 at 5837.238 kb on + strand, within AO353_26655 at 5837.253 kb on + strand, within AO353_26655 at 5837.253 kb on + strand, within AO353_26655 at 5837.254 kb on - strand, within AO353_26655 at 5837.287 kb on + strand, within AO353_26655 at 5837.287 kb on + strand, within AO353_26655 at 5837.288 kb on - strand, within AO353_26655 at 5837.333 kb on - strand, within AO353_26655 at 5837.383 kb on + strand, within AO353_26655 at 5837.383 kb on + strand, within AO353_26655 at 5837.384 kb on - strand at 5837.443 kb on + strand, within AO353_26655 at 5837.443 kb on + strand, within AO353_26655 at 5837.443 kb on + strand, within AO353_26655 at 5837.443 kb on + strand, within AO353_26655 at 5837.444 kb on - strand, within AO353_26655 at 5837.708 kb on - strand, within AO353_26655 at 5837.770 kb on + strand at 5837.770 kb on + strand at 5837.770 kb on + strand at 5837.771 kb on - strand at 5837.896 kb on + strand at 5837.897 kb on - strand at 5837.910 kb on + strand at 5837.910 kb on + strand at 5837.911 kb on - strand at 5837.911 kb on - strand at 5837.980 kb on + strand at 5837.980 kb on + strand at 5837.981 kb on - strand at 5837.981 kb on - strand at 5837.983 kb on + strand at 5837.983 kb on + strand at 5837.984 kb on - strand at 5837.984 kb on - strand at 5837.984 kb on - strand at 5837.984 kb on - strand at 5837.984 kb on - strand at 5837.984 kb on - strand at 5837.984 kb on - strand at 5837.984 kb on - strand at 5837.984 kb on - strand at 5837.984 kb on - strand at 5837.984 kb on - strand at 5837.984 kb on - strand at 5838.002 kb on + strand, within AO353_26660 at 5838.003 kb on - strand, within AO353_26660 at 5838.079 kb on - strand, within AO353_26660 at 5838.079 kb on - strand, within AO353_26660 at 5838.221 kb on + strand, within AO353_26660 at 5838.221 kb on + strand, within AO353_26660 at 5838.221 kb on + strand, within AO353_26660 at 5838.221 kb on + strand, within AO353_26660 at 5838.221 kb on + strand, within AO353_26660 at 5838.221 kb on + strand, within AO353_26660 at 5838.221 kb on + strand, within AO353_26660 at 5838.221 kb on + strand, within AO353_26660 at 5838.221 kb on + strand, within AO353_26660 at 5838.222 kb on - strand, within AO353_26660 at 5838.222 kb on - strand, within AO353_26660 at 5838.222 kb on - strand, within AO353_26660 at 5838.222 kb on - strand, within AO353_26660 at 5838.222 kb on - strand, within AO353_26660 at 5838.222 kb on - strand, within AO353_26660 at 5838.222 kb on - strand, within AO353_26660 at 5838.309 kb on + strand, within AO353_26660 at 5838.309 kb on + strand, within AO353_26660 at 5838.309 kb on + strand, within AO353_26660 at 5838.310 kb on - strand, within AO353_26660 at 5838.319 kb on + strand, within AO353_26660 at 5838.319 kb on + strand, within AO353_26660 at 5838.319 kb on + strand, within AO353_26660 at 5838.319 kb on + strand, within AO353_26660 at 5838.319 kb on + strand, within AO353_26660 at 5838.319 kb on + strand, within AO353_26660 at 5838.320 kb on - strand, within AO353_26660 at 5838.320 kb on - strand, within AO353_26660 at 5838.320 kb on - strand, within AO353_26660 at 5838.320 kb on - strand, within AO353_26660 at 5838.320 kb on - strand, within AO353_26660 at 5838.580 kb on + strand, within AO353_26660 at 5838.580 kb on + strand, within AO353_26660 at 5838.580 kb on + strand, within AO353_26660 at 5838.580 kb on + strand, within AO353_26660 at 5838.581 kb on - strand, within AO353_26660 at 5838.581 kb on - strand, within AO353_26660 at 5838.581 kb on - strand, within AO353_26660 at 5838.807 kb on + strand at 5838.808 kb on - strand at 5838.808 kb on - strand at 5838.820 kb on + strand at 5838.820 kb on + strand at 5838.820 kb on + strand at 5838.820 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine (C) remove 5,835,848 + AO353_26650 0.53 -0.0 5,835,924 - -0.5 5,836,177 + AO353_26650 0.76 -0.7 5,836,177 + AO353_26650 0.76 -1.8 5,836,184 + AO353_26650 0.77 -1.1 5,836,492 + +0.2 5,836,492 + +1.8 5,836,492 + -0.3 5,836,492 + +0.7 5,836,493 - -0.3 5,836,493 - -1.9 5,836,580 + -0.5 5,836,580 + -1.2 5,836,601 - -2.7 5,836,712 + -0.7 5,836,729 + +0.2 5,836,745 + +0.7 5,836,745 + -1.5 5,836,745 + +0.8 5,836,745 + +0.7 5,836,745 + -1.3 5,836,745 + +0.1 5,836,745 + -0.2 5,836,745 + -0.8 5,836,745 + -0.0 5,836,745 + -1.6 5,836,746 - -0.7 5,836,746 - -1.7 5,836,746 - -1.9 5,836,746 - -0.5 5,836,746 - +0.5 5,836,746 - -2.1 5,836,746 - +0.1 5,836,746 - -0.3 5,836,746 - -0.2 5,836,801 + +0.5 5,836,802 - +2.0 5,836,808 + +0.3 5,836,861 + -1.1 5,836,861 + +0.4 5,836,862 - +0.5 5,836,862 - -0.1 5,836,862 - -1.4 5,836,862 - -1.6 5,836,882 + +0.5 5,836,883 - +0.2 5,836,883 - +0.9 5,836,883 - -0.9 5,836,975 + AO353_26655 0.15 +0.2 5,837,191 + AO353_26655 0.36 -0.1 5,837,191 + AO353_26655 0.36 +0.2 5,837,238 + AO353_26655 0.41 -1.0 5,837,253 + AO353_26655 0.43 -1.6 5,837,253 + AO353_26655 0.43 +0.6 5,837,254 - AO353_26655 0.43 +0.0 5,837,287 + AO353_26655 0.46 -1.7 5,837,287 + AO353_26655 0.46 -1.3 5,837,288 - AO353_26655 0.46 -3.2 5,837,333 - AO353_26655 0.50 -0.7 5,837,383 + AO353_26655 0.55 +1.1 5,837,383 + AO353_26655 0.55 -0.5 5,837,384 - +0.5 5,837,443 + AO353_26655 0.61 -2.3 5,837,443 + AO353_26655 0.61 +0.9 5,837,443 + AO353_26655 0.61 +0.9 5,837,443 + AO353_26655 0.61 -1.5 5,837,444 - AO353_26655 0.61 -1.7 5,837,708 - AO353_26655 0.87 +0.5 5,837,770 + -2.1 5,837,770 + -0.8 5,837,770 + -0.2 5,837,771 - -2.7 5,837,896 + -1.0 5,837,897 - -0.7 5,837,910 + +0.0 5,837,910 + +0.9 5,837,911 - +0.4 5,837,911 - -1.1 5,837,980 + +0.9 5,837,980 + +0.2 5,837,981 - -1.0 5,837,981 - +0.3 5,837,983 + -0.1 5,837,983 + +2.1 5,837,984 - -0.5 5,837,984 - +0.2 5,837,984 - -0.9 5,837,984 - -0.0 5,837,984 - +0.9 5,837,984 - -1.2 5,837,984 - +0.7 5,837,984 - -0.4 5,837,984 - -0.0 5,837,984 - +0.8 5,837,984 - -1.0 5,837,984 - -2.1 5,838,002 + AO353_26660 0.12 -0.7 5,838,003 - AO353_26660 0.12 -0.5 5,838,079 - AO353_26660 0.21 +0.0 5,838,079 - AO353_26660 0.21 +0.1 5,838,221 + AO353_26660 0.36 -0.5 5,838,221 + AO353_26660 0.36 -0.2 5,838,221 + AO353_26660 0.36 -0.7 5,838,221 + AO353_26660 0.36 -0.1 5,838,221 + AO353_26660 0.36 -0.2 5,838,221 + AO353_26660 0.36 -0.7 5,838,221 + AO353_26660 0.36 -0.7 5,838,221 + AO353_26660 0.36 -0.3 5,838,221 + AO353_26660 0.36 -0.2 5,838,222 - AO353_26660 0.37 -0.2 5,838,222 - AO353_26660 0.37 -1.4 5,838,222 - AO353_26660 0.37 -1.1 5,838,222 - AO353_26660 0.37 +0.8 5,838,222 - AO353_26660 0.37 -0.5 5,838,222 - AO353_26660 0.37 -0.6 5,838,222 - AO353_26660 0.37 -1.1 5,838,309 + AO353_26660 0.46 +0.1 5,838,309 + AO353_26660 0.46 -0.3 5,838,309 + AO353_26660 0.46 +0.0 5,838,310 - AO353_26660 0.46 +0.3 5,838,319 + AO353_26660 0.47 -0.8 5,838,319 + AO353_26660 0.47 -0.7 5,838,319 + AO353_26660 0.47 +1.5 5,838,319 + AO353_26660 0.47 -0.1 5,838,319 + AO353_26660 0.47 -2.8 5,838,319 + AO353_26660 0.47 +0.5 5,838,320 - AO353_26660 0.48 -0.6 5,838,320 - AO353_26660 0.48 -0.2 5,838,320 - AO353_26660 0.48 -0.7 5,838,320 - AO353_26660 0.48 -0.7 5,838,320 - AO353_26660 0.48 -1.2 5,838,580 + AO353_26660 0.77 +0.9 5,838,580 + AO353_26660 0.77 -1.2 5,838,580 + AO353_26660 0.77 -0.3 5,838,580 + AO353_26660 0.77 -1.3 5,838,581 - AO353_26660 0.77 -0.8 5,838,581 - AO353_26660 0.77 -0.8 5,838,581 - AO353_26660 0.77 -1.3 5,838,807 + -0.1 5,838,808 - -1.1 5,838,808 - +1.9 5,838,820 + +0.4 5,838,820 + -2.6 5,838,820 + -0.9 5,838,820 + +0.2
Or see this region's nucleotide sequence