Strain Fitness in Shewanella sp. ANA-3 around Shewana3_4080

Experiment: Carbon source Sucrose 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Sucrose 5 mM
4,901,642	+		Shewana3_4078	0.58	-2.1
4,901,653	+		Shewana3_4078	0.59	-1.9
4,901,675	-		Shewana3_4078	0.62	-0.8
4,901,675	-		Shewana3_4078	0.62	-1.7
4,901,730	-		Shewana3_4078	0.70	-1.2
4,901,753	+		Shewana3_4078	0.73	+0.8
4,901,753	+		Shewana3_4078	0.73	-1.5
4,901,753	+		Shewana3_4078	0.73	-1.2
4,901,753	+		Shewana3_4078	0.73	-3.5
4,901,761	-		Shewana3_4078	0.75	-0.7
4,901,761	-		Shewana3_4078	0.75	-0.3
4,901,858	+		Shewana3_4078	0.88	-0.6
4,901,949	-				-1.0
4,901,984	+				-1.3
4,901,992	-				-1.4
4,902,017	+		Shewana3_4079	0.10	-2.1
4,902,017	+		Shewana3_4079	0.10	-2.7
4,902,017	+		Shewana3_4079	0.10	-3.2
4,902,025	-		Shewana3_4079	0.11	-2.3
4,902,025	-		Shewana3_4079	0.11	-1.3
4,902,025	-		Shewana3_4079	0.11	-1.6
4,902,025	-		Shewana3_4079	0.11	+0.1
4,902,025	-		Shewana3_4079	0.11	-1.9
4,902,025	-		Shewana3_4079	0.11	-1.5
4,902,025	-		Shewana3_4079	0.11	-2.4
4,902,133	-		Shewana3_4079	0.27	-1.5
4,902,232	-		Shewana3_4079	0.41	-3.0
4,902,233	+		Shewana3_4079	0.41	-0.7
4,902,368	+		Shewana3_4079	0.60	-1.8
4,902,637	-				-1.2
4,902,776	+		Shewana3_4080	0.24	-0.3
4,902,776	+		Shewana3_4080	0.24	-2.6
4,902,830	-		Shewana3_4080	0.33	-2.6
4,902,840	-		Shewana3_4080	0.35	-2.6
4,902,861	+		Shewana3_4080	0.38	-2.2
4,902,990	+		Shewana3_4080	0.60	-1.0
4,903,003	-		Shewana3_4080	0.62	-0.2
4,903,050	+		Shewana3_4080	0.70	-1.4
4,903,171	-				-1.7
4,903,255	+				+0.2
4,903,359	+				-0.9
4,903,390	+				+2.1
4,903,638	-		Shewana3_4081	0.21	-1.5
4,904,061	-		Shewana3_4081	0.45	-2.4
4,904,100	+		Shewana3_4081	0.47	-0.8
4,904,108	-		Shewana3_4081	0.47	-1.4
4,904,108	-		Shewana3_4081	0.47	-0.0
4,904,108	-		Shewana3_4081	0.47	-3.1
4,904,173	-		Shewana3_4081	0.51	-3.9
4,904,217	+		Shewana3_4081	0.53	-1.2