Strain Fitness in Shewanella sp. ANA-3 around Shewana3_4075

Experiment: Carbon source Sucrose 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Sucrose 5 mM
4,895,640	-		Shewana3_4073	0.78	-0.6
4,895,694	+		Shewana3_4073	0.86	-1.2
4,895,695	+		Shewana3_4073	0.86	+0.7
4,895,700	+		Shewana3_4073	0.87	+0.8
4,895,703	-		Shewana3_4073	0.87	+0.2
4,895,709	-		Shewana3_4073	0.88	+0.1
4,895,923	+				-0.1
4,896,066	+		Shewana3_4074	0.38	+0.3
4,896,067	+		Shewana3_4074	0.39	+0.3
4,896,075	-		Shewana3_4074	0.40	+0.2
4,896,097	-		Shewana3_4074	0.45	-0.7
4,896,207	-		Shewana3_4074	0.69	-0.9
4,896,292	-		Shewana3_4074	0.87	+0.8
4,896,313	+				+0.1
4,896,323	+				+0.1
4,896,655	-				-0.1
4,896,716	-				-2.0
4,896,723	-				-2.7
4,896,725	+				-0.9
4,896,745	-				-2.7
4,896,814	+				-1.7
4,896,814	+				-2.1
4,896,814	+				-2.3
4,896,822	-				-1.3
4,896,822	-				-1.9
4,896,866	-		Shewana3_4075	0.12	-1.9
4,897,032	-		Shewana3_4075	0.20	-1.3
4,897,064	-		Shewana3_4075	0.21	-2.4
4,897,136	-		Shewana3_4075	0.25	-1.7
4,897,138	+		Shewana3_4075	0.25	-2.3
4,897,161	+		Shewana3_4075	0.26	-1.7
4,897,238	+		Shewana3_4075	0.29	-1.6
4,897,282	-		Shewana3_4075	0.32	-0.7
4,897,428	-		Shewana3_4075	0.38	-2.0
4,897,493	-		Shewana3_4075	0.41	-2.2
4,897,826	-		Shewana3_4075	0.57	-1.5
4,897,866	-		Shewana3_4075	0.59	-0.6
4,897,866	-		Shewana3_4075	0.59	-1.4
4,897,866	-		Shewana3_4075	0.59	-1.6
4,897,866	-		Shewana3_4075	0.59	-2.9
4,898,119	+		Shewana3_4075	0.71	-3.0
4,898,126	+		Shewana3_4075	0.71	-3.8
4,898,172	+		Shewana3_4075	0.73	-0.9
4,898,296	-		Shewana3_4075	0.79	+0.3
4,898,296	-		Shewana3_4075	0.79	-1.2
4,898,306	-		Shewana3_4075	0.79	-2.3
4,898,428	-		Shewana3_4075	0.85	-1.5
4,898,490	+		Shewana3_4075	0.88	-1.6
4,898,665	+				-1.5
4,898,923	-		Shewana3_4076	0.13	-1.4
4,898,938	+		Shewana3_4076	0.14	-1.3
4,898,938	+		Shewana3_4076	0.14	-2.1
4,898,938	+		Shewana3_4076	0.14	+0.5
4,898,946	-		Shewana3_4076	0.15	-1.4
4,898,946	-		Shewana3_4076	0.15	+1.1
4,898,966	-		Shewana3_4076	0.16	-1.1
4,898,989	-		Shewana3_4076	0.18	-1.7
4,899,018	+		Shewana3_4076	0.20	-2.3
4,899,019	-		Shewana3_4076	0.20	-1.3
4,899,026	-		Shewana3_4076	0.20	-2.2
4,899,052	+		Shewana3_4076	0.22	-1.7
4,899,059	+		Shewana3_4076	0.23	-1.8
4,899,066	+		Shewana3_4076	0.23	-1.8
4,899,320	+		Shewana3_4076	0.42	-1.9
4,899,320	+		Shewana3_4076	0.42	-1.3
4,899,330	+		Shewana3_4076	0.42	-1.2
4,899,338	-		Shewana3_4076	0.43	-1.6
4,899,471	+		Shewana3_4076	0.52	-1.4
4,899,471	+		Shewana3_4076	0.52	+0.1
4,899,614	-		Shewana3_4076	0.63	-1.6
4,899,675	+		Shewana3_4076	0.67	-1.2
4,899,675	+		Shewana3_4076	0.67	-2.5