Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3997

Experiment: Carbon source Sucrose 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Sucrose 5 mM
4,798,439	-		Shewana3_3995	0.64	+0.8
4,798,547	+		Shewana3_3995	0.76	+0.0
4,798,581	+		Shewana3_3995	0.80	+0.2
4,798,592	+		Shewana3_3995	0.81	-0.8
4,798,600	-		Shewana3_3995	0.82	+0.3
4,798,682	+				-0.1
4,798,921	-		Shewana3_3996	0.16	+0.2
4,799,016	+		Shewana3_3996	0.33	-1.1
4,799,040	-		Shewana3_3996	0.38	+0.2
4,799,119	+		Shewana3_3996	0.52	-0.9
4,799,119	+		Shewana3_3996	0.52	+0.1
4,799,127	-		Shewana3_3996	0.54	-0.7
4,799,127	-		Shewana3_3996	0.54	+0.8
4,799,181	-		Shewana3_3996	0.64	+0.7
4,799,183	+		Shewana3_3996	0.64	-0.5
4,799,183	+		Shewana3_3996	0.64	+0.4
4,799,190	+		Shewana3_3996	0.65	+0.2
4,799,191	-		Shewana3_3996	0.65	-0.7
4,799,234	+		Shewana3_3996	0.73	+0.2
4,799,244	+		Shewana3_3996	0.75	-0.1
4,799,280	+		Shewana3_3996	0.82	+1.0
4,799,293	+		Shewana3_3996	0.84	+0.6
4,799,293	+		Shewana3_3996	0.84	+0.4
4,799,301	-		Shewana3_3996	0.86	-1.1
4,799,322	+		Shewana3_3996	0.89	+0.9
4,799,322	+		Shewana3_3996	0.89	-0.5
4,799,330	-				+0.3
4,799,382	+				-0.1
4,799,406	+				-0.2
4,799,441	+				+0.4
4,799,708	-		Shewana3_3997	0.31	+0.6
4,799,724	+		Shewana3_3997	0.33	-0.3
4,799,732	+		Shewana3_3997	0.33	-0.1
4,799,732	-		Shewana3_3997	0.33	-1.1
4,799,948	+		Shewana3_3997	0.54	-1.4
4,799,948	+		Shewana3_3997	0.54	-0.5
4,800,023	-		Shewana3_3997	0.61	-0.4
4,800,025	+		Shewana3_3997	0.61	+0.7
4,800,033	-		Shewana3_3997	0.62	-0.6
4,800,039	+		Shewana3_3997	0.62	+0.4
4,800,107	+		Shewana3_3997	0.69	-0.3
4,800,128	+		Shewana3_3997	0.71	+0.9
4,800,260	+		Shewana3_3997	0.83	-0.2
4,800,268	-		Shewana3_3997	0.84	-0.1
4,800,275	-		Shewana3_3997	0.85	-1.6
4,800,300	+		Shewana3_3997	0.87	-0.3
4,800,551	-		Shewana3_3998	0.11	+0.3
4,800,551	-		Shewana3_3998	0.11	+0.9
4,800,581	+		Shewana3_3998	0.14	-2.6
4,800,608	+		Shewana3_3998	0.17	-0.5
4,800,659	+		Shewana3_3998	0.23	-3.0
4,800,667	-		Shewana3_3998	0.23	+0.2
4,800,751	+		Shewana3_3998	0.33	+0.8
4,800,770	+		Shewana3_3998	0.35	+0.1
4,800,778	-		Shewana3_3998	0.36	-2.4
4,800,937	-		Shewana3_3998	0.53	+1.0
4,801,106	-		Shewana3_3998	0.72	-0.4
4,801,165	-		Shewana3_3998	0.79	+0.1
4,801,189	+		Shewana3_3998	0.81	-0.4
4,801,407	+				+0.1