Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3985

Experiment: Carbon source Sucrose 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Sucrose 5 mM
4,783,869	-		Shewana3_3984	0.48	-0.2
4,783,928	+		Shewana3_3984	0.53	-0.1
4,783,936	-		Shewana3_3984	0.54	-0.8
4,784,040	+		Shewana3_3984	0.63	-0.7
4,784,110	-		Shewana3_3984	0.69	-2.4
4,784,110	-		Shewana3_3984	0.69	+0.4
4,784,146	-		Shewana3_3984	0.72	+0.1
4,784,304	+		Shewana3_3984	0.86	-0.0
4,784,314	+		Shewana3_3984	0.87	-0.3
4,784,315	+		Shewana3_3984	0.87	+0.2
4,784,315	+		Shewana3_3984	0.87	+0.2
4,784,322	-		Shewana3_3984	0.87	+0.7
4,784,357	+				-0.2
4,784,365	-				+0.8
4,784,543	-				+0.9
4,784,669	-				+0.0
4,784,720	+				-0.6
4,784,776	+				-0.7
4,784,786	+				-0.4
4,784,817	-				+0.4
4,785,218	+		Shewana3_3985	0.27	-0.4
4,785,399	+		Shewana3_3985	0.36	+0.9
4,785,632	-		Shewana3_3985	0.48	+0.4
4,785,649	-		Shewana3_3985	0.49	-0.2
4,785,660	-		Shewana3_3985	0.49	-0.1
4,785,864	+		Shewana3_3985	0.60	-0.7
4,785,902	+		Shewana3_3985	0.62	+0.3
4,786,027	+		Shewana3_3985	0.68	-0.4
4,786,095	-		Shewana3_3985	0.72	-0.7
4,786,145	-		Shewana3_3985	0.74	-0.5
4,786,189	-		Shewana3_3985	0.76	+0.2
4,786,281	-		Shewana3_3985	0.81	+1.3
4,786,294	-		Shewana3_3985	0.82	-0.3
4,786,386	+		Shewana3_3985	0.86	+0.5
4,786,494	+				+0.0
4,786,577	-				+0.7
4,786,586	+				-0.1
4,786,602	+				+0.3
4,786,648	-				+0.5
4,786,648	-				-0.8
4,786,648	-				-0.5
4,786,773	-				+0.4
4,786,773	-				-0.5
4,786,864	+		Shewana3_3986	0.12	+0.1
4,786,951	+		Shewana3_3986	0.24	+1.3
4,787,096	+		Shewana3_3986	0.42	+0.1
4,787,096	+		Shewana3_3986	0.42	-0.5
4,787,111	+		Shewana3_3986	0.44	+0.2
4,787,116	+		Shewana3_3986	0.45	+1.1
4,787,116	+		Shewana3_3986	0.45	-0.5
4,787,126	+		Shewana3_3986	0.46	+0.4
4,787,181	+		Shewana3_3986	0.53	+1.1
4,787,371	+		Shewana3_3986	0.78	+0.7
4,787,514	-				+0.5
4,787,531	+				+0.5
4,787,539	-				+0.7
4,787,541	-				+1.0
4,787,569	+				+0.4
4,787,596	-				-0.6