Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3965

Experiment: Carbon source Sucrose 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Sucrose 5 mM
4,762,158	-		Shewana3_3964	0.17	-0.8
4,762,206	+		Shewana3_3964	0.22	+0.4
4,762,251	+		Shewana3_3964	0.26	-1.3
4,762,291	-		Shewana3_3964	0.30	+1.7
4,762,292	-		Shewana3_3964	0.31	-0.2
4,762,292	-		Shewana3_3964	0.31	-1.0
4,762,292	-		Shewana3_3964	0.31	-0.1
4,762,316	+		Shewana3_3964	0.33	+1.0
4,762,323	+		Shewana3_3964	0.34	+0.1
4,762,341	+		Shewana3_3964	0.36	+1.0
4,762,341	+		Shewana3_3964	0.36	+0.2
4,762,341	+		Shewana3_3964	0.36	+0.4
4,762,341	+		Shewana3_3964	0.36	+0.6
4,762,342	+		Shewana3_3964	0.36	+0.5
4,762,349	-		Shewana3_3964	0.36	-0.6
4,762,349	-		Shewana3_3964	0.36	-0.6
4,762,350	-		Shewana3_3964	0.37	-0.7
4,762,350	-		Shewana3_3964	0.37	-0.2
4,762,382	+		Shewana3_3964	0.40	+0.1
4,762,382	+		Shewana3_3964	0.40	-0.4
4,762,390	-		Shewana3_3964	0.41	-1.2
4,762,411	+		Shewana3_3964	0.43	+0.3
4,762,413	+		Shewana3_3964	0.43	+0.9
4,762,421	-		Shewana3_3964	0.44	-2.8
4,762,440	+		Shewana3_3964	0.46	+0.1
4,762,440	+		Shewana3_3964	0.46	-0.4
4,762,466	-		Shewana3_3964	0.49	+0.3
4,762,514	+		Shewana3_3964	0.53	+0.5
4,762,636	-		Shewana3_3964	0.66	+0.1
4,762,636	-		Shewana3_3964	0.66	+0.3
4,762,636	-		Shewana3_3964	0.66	+0.4
4,762,638	+		Shewana3_3964	0.66	-0.5
4,762,648	-		Shewana3_3964	0.67	-0.4
4,762,711	+		Shewana3_3964	0.74	+0.4
4,762,721	+		Shewana3_3964	0.75	+0.4
4,762,781	-		Shewana3_3964	0.81	+0.5
4,762,802	+		Shewana3_3964	0.83	+0.2
4,762,810	+		Shewana3_3964	0.84	+0.4
4,762,818	-		Shewana3_3964	0.85	+1.2
4,763,002	+				-0.2
4,763,024	+				-4.4
4,763,037	-				+0.9
4,763,045	+				-1.0
4,763,112	-				-1.9
4,763,124	-				+0.5
4,763,124	-				+2.1
4,763,168	-				+0.9
4,763,214	-				+2.1
4,763,260	+				+1.1
4,763,459	-		Shewana3_3965	0.19	+1.7
4,763,550	-		Shewana3_3965	0.24	+1.1
4,763,596	+		Shewana3_3965	0.27	-0.5
4,763,639	-		Shewana3_3965	0.29	+0.5
4,763,834	-		Shewana3_3965	0.40	-1.0
4,763,980	+		Shewana3_3965	0.49	-0.5
4,763,980	+		Shewana3_3965	0.49	+0.8
4,763,980	+		Shewana3_3965	0.49	+1.1
4,764,044	+		Shewana3_3965	0.53	+2.1
4,764,121	-		Shewana3_3965	0.57	-0.7
4,764,130	+		Shewana3_3965	0.58	+0.5
4,764,146	+		Shewana3_3965	0.58	+2.1
4,764,163	-		Shewana3_3965	0.59	-0.2
4,764,212	+		Shewana3_3965	0.62	-1.0
4,764,220	+		Shewana3_3965	0.63	-0.7
4,764,296	+		Shewana3_3965	0.67	-1.5
4,764,395	-		Shewana3_3965	0.73	+2.1
4,764,608	+		Shewana3_3965	0.85	-0.2
4,764,882	+				+0.8
4,764,962	-		Shewana3_3966	0.13	+2.1
4,765,047	+		Shewana3_3966	0.23	-2.0
4,765,047	-		Shewana3_3966	0.23	+2.1
4,765,135	-		Shewana3_3966	0.34	+0.2
4,765,142	+		Shewana3_3966	0.35	+0.1
4,765,142	+		Shewana3_3966	0.35	-0.2
4,765,150	-		Shewana3_3966	0.36	-1.2
4,765,159	+		Shewana3_3966	0.37	-0.3
4,765,400	-		Shewana3_3966	0.67	-0.5
4,765,400	-		Shewana3_3966	0.67	-0.5
4,765,577	-		Shewana3_3966	0.89	+0.3
4,765,634	-				+1.1
4,765,725	+				+1.0
4,765,776	+				-0.2
4,765,804	-		Shewana3_3967	0.11	-1.0