Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3918

Experiment: Carbon source Sucrose 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Sucrose 5 mM
4,706,677	+				-2.1
4,706,716	-				-2.1
4,706,716	-				-2.7
4,706,716	-				-1.6
4,706,818	+				-1.7
4,706,970	-		Shewana3_3917	0.20	-1.9
4,707,018	+		Shewana3_3917	0.28	-0.2
4,707,018	+		Shewana3_3917	0.28	-2.3
4,707,093	+		Shewana3_3917	0.41	-0.3
4,707,093	+		Shewana3_3917	0.41	+0.3
4,707,155	-		Shewana3_3917	0.51	-0.5
4,707,343	-		Shewana3_3917	0.83	-1.7
4,707,450	+				-1.7
4,707,464	-				-1.1
4,707,470	+				-2.1
4,707,470	+				-0.9
4,707,470	+				-1.5
4,707,478	-				+0.2
4,707,478	-				-1.9
4,707,546	-				-1.8
4,707,551	-				-1.6
4,707,668	+		Shewana3_3918	0.17	-2.1
4,707,696	-		Shewana3_3918	0.19	-3.8
4,707,696	-		Shewana3_3918	0.19	-2.2
4,707,696	-		Shewana3_3918	0.19	-1.9
4,707,890	+		Shewana3_3918	0.38	-1.6
4,707,935	+		Shewana3_3918	0.43	-2.6
4,708,004	-		Shewana3_3918	0.49	-1.5
4,708,031	-		Shewana3_3918	0.52	-2.1
4,708,047	+		Shewana3_3918	0.54	-0.4
4,708,047	+		Shewana3_3918	0.54	-1.4
4,708,047	+		Shewana3_3918	0.54	-1.8
4,708,047	+		Shewana3_3918	0.54	-0.1
4,708,116	-		Shewana3_3918	0.60	-1.4
4,708,123	-		Shewana3_3918	0.61	+0.2
4,708,166	+		Shewana3_3918	0.65	-2.1
4,708,230	+		Shewana3_3918	0.71	-1.3
4,708,238	-		Shewana3_3918	0.72	-2.3
4,708,263	-		Shewana3_3918	0.75	-2.2
4,708,300	+		Shewana3_3918	0.78	-1.9
4,708,330	+		Shewana3_3918	0.81	-2.3
4,708,414	+		Shewana3_3918	0.89	-2.4
4,708,422	-				-2.0
4,708,435	+				-2.5
4,708,449	+				-2.8
4,708,545	-				-0.2
4,708,760	+				+0.5
4,708,878	+				-1.1
4,708,879	+				-2.1
4,708,903	+				-1.5
4,709,015	-		Shewana3_3919	0.55	-0.1
4,709,015	-		Shewana3_3919	0.55	+0.0
4,709,035	+		Shewana3_3919	0.65	-1.0
4,709,045	+		Shewana3_3919	0.70	-0.7
4,709,045	+		Shewana3_3919	0.70	-1.5
4,709,045	+		Shewana3_3919	0.70	-0.8
4,709,053	-		Shewana3_3919	0.74	-0.4
4,709,053	-		Shewana3_3919	0.74	-0.2
4,709,053	-		Shewana3_3919	0.74	-2.4
4,709,053	-		Shewana3_3919	0.74	+0.4
4,709,053	-		Shewana3_3919	0.74	-0.0
4,709,053	-		Shewana3_3919	0.74	-3.6
4,709,053	-		Shewana3_3919	0.74	+0.7
4,709,057	+		Shewana3_3919	0.76	-0.9
4,709,057	+		Shewana3_3919	0.76	+2.1
4,709,057	+		Shewana3_3919	0.76	-0.8
4,709,240	+				+0.3
4,709,255	+				+0.2
4,709,285	+				+0.5
4,709,392	-				-0.5
4,709,523	+		Shewana3_3920	0.14	+0.6