Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3916

Experiment: Carbon source Sucrose 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Sucrose 5 mM
4,703,110	-		Shewana3_3914	0.29	-0.7
4,703,131	+		Shewana3_3914	0.32	-1.7
4,703,149	-		Shewana3_3914	0.35	-0.4
4,703,185	+		Shewana3_3914	0.40	-2.5
4,703,213	+		Shewana3_3914	0.45	-2.6
4,703,303	+		Shewana3_3914	0.58	-3.4
4,703,310	+		Shewana3_3914	0.59	-2.1
4,703,311	-		Shewana3_3914	0.59	-1.1
4,703,337	+		Shewana3_3914	0.63	-1.1
4,703,411	-		Shewana3_3914	0.74	-1.1
4,703,614	+				+0.4
4,703,794	+		Shewana3_3915	0.19	+0.8
4,703,815	-		Shewana3_3915	0.30	-2.1
4,703,871	+		Shewana3_3915	0.58	-0.7
4,703,921	+		Shewana3_3915	0.83	-1.0
4,703,962	-				-2.1
4,704,101	+				-1.4
4,704,103	+				-1.9
4,704,111	-				-0.0
4,704,126	-				-2.1
4,704,193	-				-3.2
4,704,243	-				-2.6
4,704,243	-				-1.9
4,704,469	-		Shewana3_3916	0.17	-0.4
4,704,588	+		Shewana3_3916	0.22	+0.1
4,704,629	+		Shewana3_3916	0.23	-1.2
4,704,750	-		Shewana3_3916	0.27	-1.4
4,704,818	-		Shewana3_3916	0.30	-1.6
4,704,853	-		Shewana3_3916	0.31	-1.5
4,704,877	+		Shewana3_3916	0.32	-1.7
4,704,941	+		Shewana3_3916	0.34	-1.6
4,705,009	+		Shewana3_3916	0.36	-2.0
4,705,017	-		Shewana3_3916	0.37	-0.8
4,705,031	-		Shewana3_3916	0.37	-0.6
4,705,080	-		Shewana3_3916	0.39	-2.5
4,705,151	+		Shewana3_3916	0.41	-0.8
4,705,213	-		Shewana3_3916	0.44	+0.0
4,705,230	-		Shewana3_3916	0.44	-0.2
4,705,287	-		Shewana3_3916	0.46	-1.2
4,705,287	-		Shewana3_3916	0.46	-0.5
4,705,315	+		Shewana3_3916	0.47	-2.5
4,705,315	-		Shewana3_3916	0.47	-1.1
4,705,398	+		Shewana3_3916	0.50	-2.4
4,705,433	+		Shewana3_3916	0.51	+0.5
4,705,529	+		Shewana3_3916	0.55	-1.7
4,705,542	-		Shewana3_3916	0.55	-1.9
4,705,582	+		Shewana3_3916	0.56	+0.3
4,705,607	+		Shewana3_3916	0.57	-2.1
4,705,629	+		Shewana3_3916	0.58	-2.0
4,705,765	+		Shewana3_3916	0.63	-1.7
4,705,779	+		Shewana3_3916	0.63	-2.0
4,705,787	-		Shewana3_3916	0.64	-2.0
4,705,789	+		Shewana3_3916	0.64	-0.4
4,705,799	-		Shewana3_3916	0.64	-1.4
4,706,006	+		Shewana3_3916	0.71	-1.9
4,706,008	+		Shewana3_3916	0.71	-2.0
4,706,008	+		Shewana3_3916	0.71	-1.7
4,706,014	-		Shewana3_3916	0.72	+2.1
4,706,016	-		Shewana3_3916	0.72	-2.1
4,706,125	-		Shewana3_3916	0.75	-2.2
4,706,174	-		Shewana3_3916	0.77	-3.0
4,706,174	-		Shewana3_3916	0.77	-1.3
4,706,179	-		Shewana3_3916	0.77	-1.1
4,706,216	+		Shewana3_3916	0.79	-2.2
4,706,216	+		Shewana3_3916	0.79	-3.7
4,706,224	-		Shewana3_3916	0.79	-1.0
4,706,295	+		Shewana3_3916	0.81	-2.2
4,706,303	-		Shewana3_3916	0.82	-1.7
4,706,303	-		Shewana3_3916	0.82	-0.6
4,706,373	+		Shewana3_3916	0.84	-1.7
4,706,381	-		Shewana3_3916	0.84	-1.9
4,706,381	-		Shewana3_3916	0.84	-1.0
4,706,677	+				-2.1
4,706,716	-				-2.1
4,706,716	-				-2.7
4,706,716	-				-1.6
4,706,818	+				-1.7
4,706,970	-		Shewana3_3917	0.20	-1.9
4,707,018	+		Shewana3_3917	0.28	-0.2
4,707,018	+		Shewana3_3917	0.28	-2.3
4,707,093	+		Shewana3_3917	0.41	-0.3
4,707,093	+		Shewana3_3917	0.41	+0.3
4,707,155	-		Shewana3_3917	0.51	-0.5
4,707,343	-		Shewana3_3917	0.83	-1.7
4,707,450	+				-1.7
4,707,464	-				-1.1
4,707,470	+				-2.1
4,707,470	+				-0.9
4,707,470	+				-1.5
4,707,478	-				+0.2
4,707,478	-				-1.9
4,707,546	-				-1.8
4,707,551	-				-1.6
4,707,668	+		Shewana3_3918	0.17	-2.1
4,707,696	-		Shewana3_3918	0.19	-3.8
4,707,696	-		Shewana3_3918	0.19	-2.2
4,707,696	-		Shewana3_3918	0.19	-1.9