Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3842

Experiment: Carbon source Sucrose 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Sucrose 5 mM
4,611,913	-		Shewana3_3841	0.33	-0.4
4,612,013	-		Shewana3_3841	0.40	-0.8
4,612,021	+		Shewana3_3841	0.41	-0.3
4,612,021	+		Shewana3_3841	0.41	-2.2
4,612,029	-		Shewana3_3841	0.41	-0.2
4,612,057	+		Shewana3_3841	0.43	+1.1
4,612,207	+		Shewana3_3841	0.53	-1.2
4,612,377	-		Shewana3_3841	0.65	+0.1
4,612,410	+		Shewana3_3841	0.67	-0.7
4,612,443	-		Shewana3_3841	0.70	+0.8
4,612,526	+		Shewana3_3841	0.75	+0.1
4,612,526	+		Shewana3_3841	0.75	+0.4
4,612,616	-		Shewana3_3841	0.81	+0.8
4,612,680	+		Shewana3_3841	0.86	-0.2
4,612,680	+		Shewana3_3841	0.86	+0.5
4,612,680	+		Shewana3_3841	0.86	+0.8
4,612,680	+		Shewana3_3841	0.86	-0.0
4,612,680	+		Shewana3_3841	0.86	-0.9
4,612,688	-		Shewana3_3841	0.86	-2.0
4,612,688	-		Shewana3_3841	0.86	-0.1
4,612,688	-		Shewana3_3841	0.86	+0.3
4,612,688	-		Shewana3_3841	0.86	-0.2
4,612,749	+				+0.9
4,612,749	+				+0.2
4,612,767	-				+0.3
4,612,919	-				+0.2
4,612,962	+		Shewana3_3842	0.19	+0.1
4,612,970	-		Shewana3_3842	0.21	+0.5
4,613,025	-		Shewana3_3842	0.36	+1.0
4,613,046	+		Shewana3_3842	0.42	+0.6
4,613,046	+		Shewana3_3842	0.42	-0.0
4,613,054	-		Shewana3_3842	0.45	+1.2
4,613,171	-		Shewana3_3842	0.78	+0.3
4,613,420	+				+0.8
4,613,420	+				+1.0
4,613,420	+				-0.4
4,613,428	-				+0.1
4,613,428	-				+0.2
4,613,428	-				+0.9
4,613,428	-				+0.3
4,613,428	-				-1.3
4,613,518	+		Shewana3_3843	0.10	+0.9
4,613,526	-		Shewana3_3843	0.11	-0.5
4,613,619	-		Shewana3_3843	0.21	+0.9
4,613,678	-		Shewana3_3843	0.28	-1.5
4,613,712	-		Shewana3_3843	0.32	+0.1
4,613,712	-		Shewana3_3843	0.32	+1.1
4,613,747	+		Shewana3_3843	0.36	+0.1
4,613,755	-		Shewana3_3843	0.36	+0.3
4,613,774	-		Shewana3_3843	0.38	-0.5
4,613,789	+		Shewana3_3843	0.40	-0.5
4,614,070	+		Shewana3_3843	0.71	-0.2
4,614,078	-		Shewana3_3843	0.72	+0.6
4,614,078	-		Shewana3_3843	0.72	+1.9
4,614,174	+		Shewana3_3843	0.82	-0.9