Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3780

Experiment: Carbon source Sucrose 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Sucrose 5 mM
4,539,702	-		Shewana3_3779	0.34	-0.9
4,539,824	+		Shewana3_3779	0.44	+1.3
4,539,971	-		Shewana3_3779	0.56	-0.6
4,539,983	+		Shewana3_3779	0.57	-0.4
4,539,988	+		Shewana3_3779	0.58	+0.0
4,540,145	+		Shewana3_3779	0.71	+0.2
4,540,145	+		Shewana3_3779	0.71	+0.1
4,540,153	-		Shewana3_3779	0.71	+0.3
4,540,221	-		Shewana3_3779	0.77	+0.9
4,540,275	-		Shewana3_3779	0.81	+0.8
4,540,415	-				-1.2
4,540,446	+				-0.7
4,540,455	-				-0.4
4,540,525	-				+1.1
4,540,644	+				-1.2
4,540,652	-				-0.1
4,540,665	+		Shewana3_3780	0.11	+0.4
4,540,665	+		Shewana3_3780	0.11	-0.9
4,540,665	+		Shewana3_3780	0.11	+1.0
4,540,666	+		Shewana3_3780	0.11	+0.8
4,540,671	+		Shewana3_3780	0.12	-0.6
4,540,671	+		Shewana3_3780	0.12	+0.8
4,540,673	-		Shewana3_3780	0.12	-0.6
4,540,795	-		Shewana3_3780	0.27	+0.9
4,540,895	-		Shewana3_3780	0.39	-0.1
4,540,948	-		Shewana3_3780	0.45	+0.1
4,540,987	-		Shewana3_3780	0.50	+1.2
4,540,989	-		Shewana3_3780	0.50	+0.3
4,541,038	+		Shewana3_3780	0.56	-0.4
4,541,055	-		Shewana3_3780	0.58	+0.9
4,541,087	-		Shewana3_3780	0.62	-0.1
4,541,156	+		Shewana3_3780	0.71	+0.1
4,541,157	-		Shewana3_3780	0.71	-0.4
4,541,157	-		Shewana3_3780	0.71	+0.3
4,541,216	+		Shewana3_3780	0.78	-0.5
4,541,216	+		Shewana3_3780	0.78	+0.4
4,541,216	+		Shewana3_3780	0.78	+0.4
4,541,224	-		Shewana3_3780	0.79	+1.4
4,541,225	+		Shewana3_3780	0.79	+0.3
4,541,283	+		Shewana3_3780	0.86	+0.5
4,541,291	-		Shewana3_3780	0.87	+0.2
4,541,291	-		Shewana3_3780	0.87	+0.3
4,541,327	-				-0.5
4,541,347	-				+0.4
4,541,437	-				+0.1
4,541,486	+				-0.7
4,541,498	+				-0.0
4,541,515	-				+0.8
4,541,611	-		Shewana3_3781	0.47	+1.0
4,541,638	+		Shewana3_3781	0.59	+0.4
4,541,646	-		Shewana3_3781	0.62	-0.7
4,541,646	-		Shewana3_3781	0.62	+0.2
4,541,725	+				+0.5
4,541,830	+				-2.7
4,541,830	+				-0.3
4,541,830	+				-0.0
4,541,830	+				-0.0
4,541,830	+				-0.1
4,541,838	-				+0.8
4,541,838	-				-1.0
4,541,838	-				+0.5
4,541,838	-				-0.2
4,541,862	+				-0.1
4,541,886	-				-0.0
4,541,912	-				-0.1
4,541,914	+				+0.2
4,542,012	-				-0.3
4,542,020	-				+0.0
4,542,044	+				+0.0
4,542,044	+				-0.4
4,542,044	+				-0.3
4,542,044	+				-0.2
4,542,044	+				+0.3
4,542,052	-				-2.4
4,542,052	-				+0.0
4,542,052	-				+0.3
4,542,052	-				+0.2
4,542,075	-				+0.8
4,542,088	-				-0.1
4,542,113	+				+0.0
4,542,190	-				+0.0
4,542,198	+				+0.4
4,542,229	+				-0.7
4,542,229	+				-0.2
4,542,288	+		Shewana3_3782	0.16	-0.0
4,542,311	-		Shewana3_3782	0.18	-0.0
4,542,342	+		Shewana3_3782	0.22	-0.3
4,542,345	+		Shewana3_3782	0.23	+1.0
4,542,390	+		Shewana3_3782	0.28	-0.8