Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3759

Experiment: Carbon source Sucrose 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Sucrose 5 mM
4,516,842	-	leuD	Shewana3_3758	0.11	-3.9
4,516,880	+	leuD	Shewana3_3758	0.17	-3.9
4,516,898	-	leuD	Shewana3_3758	0.20	-3.9
4,516,927	-	leuD	Shewana3_3758	0.25	-4.6
4,517,011	+	leuD	Shewana3_3758	0.39	-4.1
4,517,121	+	leuD	Shewana3_3758	0.57	-3.1
4,517,146	-	leuD	Shewana3_3758	0.61	-4.5
4,517,176	+	leuD	Shewana3_3758	0.66	-4.2
4,517,270	-	leuD	Shewana3_3758	0.82	-4.4
4,517,411	+				-2.8
4,517,419	-				-0.5
4,517,478	-				-3.2
4,517,547	+		Shewana3_3759	0.10	-5.6
4,517,555	-		Shewana3_3759	0.11	-3.7
4,517,585	-		Shewana3_3759	0.13	-2.8
4,517,585	-		Shewana3_3759	0.13	-2.2
4,517,745	-		Shewana3_3759	0.24	-4.4
4,517,914	+		Shewana3_3759	0.36	-3.8
4,518,072	-		Shewana3_3759	0.47	-4.1
4,518,160	-		Shewana3_3759	0.53	-1.6
4,518,259	+		Shewana3_3759	0.60	-3.0
4,518,551	+		Shewana3_3759	0.80	-3.8
4,518,551	+		Shewana3_3759	0.80	-4.8
4,518,559	-		Shewana3_3759	0.81	-4.1
4,518,591	+		Shewana3_3759	0.83	-3.9
4,518,599	-		Shewana3_3759	0.84	-4.8
4,518,599	-		Shewana3_3759	0.84	-5.1
4,518,621	-		Shewana3_3759	0.85	-3.3
4,518,755	-				-4.7
4,519,118	-		Shewana3_3760	0.26	-2.9
4,519,187	+		Shewana3_3760	0.33	-2.1
4,519,199	+		Shewana3_3760	0.34	-3.4
4,519,329	+		Shewana3_3760	0.46	-3.7
4,519,455	+		Shewana3_3760	0.57	-3.6
4,519,468	-		Shewana3_3760	0.58	-3.1
4,519,477	+		Shewana3_3760	0.59	-1.7
4,519,485	-		Shewana3_3760	0.60	-3.5
4,519,485	-		Shewana3_3760	0.60	-2.6
4,519,486	-		Shewana3_3760	0.60	-1.2
4,519,608	-		Shewana3_3760	0.71	-2.6
4,519,609	+		Shewana3_3760	0.71	-4.5
4,519,762	+		Shewana3_3760	0.85	-3.6