Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3561

Experiment: Carbon source Sucrose 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Sucrose 5 mM
4,268,336	+		Shewana3_3560	0.35	-0.6
4,268,344	-		Shewana3_3560	0.36	+1.2
4,268,344	-		Shewana3_3560	0.36	+0.9
4,268,383	+		Shewana3_3560	0.39	-0.3
4,268,424	-		Shewana3_3560	0.42	+0.9
4,268,506	+		Shewana3_3560	0.48	-0.5
4,268,570	+		Shewana3_3560	0.53	-0.7
4,268,984	+		Shewana3_3560	0.85	-0.1
4,269,015	-		Shewana3_3560	0.87	+1.0
4,269,017	+		Shewana3_3560	0.88	+0.7
4,269,209	+				-0.0
4,269,291	+				+0.1
4,269,510	+		Shewana3_3561	0.17	-0.3
4,269,593	+		Shewana3_3561	0.23	-0.1
4,269,988	-		Shewana3_3561	0.49	+1.1
4,270,034	-		Shewana3_3561	0.52	-0.4
4,270,049	+		Shewana3_3561	0.53	+0.2
4,270,057	-		Shewana3_3561	0.53	+0.9
4,270,110	-		Shewana3_3561	0.57	-0.3
4,270,153	+		Shewana3_3561	0.60	-0.8
4,270,363	+		Shewana3_3561	0.74	+0.7
4,270,511	+		Shewana3_3561	0.83	-0.2
4,270,511	+		Shewana3_3561	0.83	-0.6
4,270,511	+		Shewana3_3561	0.83	-0.2
4,270,518	+		Shewana3_3561	0.84	+0.1
4,270,519	-		Shewana3_3561	0.84	-0.5
4,270,528	+		Shewana3_3561	0.84	-0.6
4,270,529	-		Shewana3_3561	0.85	-0.2
4,270,536	-		Shewana3_3561	0.85	-0.4
4,270,536	-		Shewana3_3561	0.85	-0.3
4,270,536	-		Shewana3_3561	0.85	-0.0
4,270,536	-		Shewana3_3561	0.85	-0.5
4,270,536	-		Shewana3_3561	0.85	-4.8
4,270,536	-		Shewana3_3561	0.85	-0.6
4,270,605	+		Shewana3_3561	0.90	-2.3
4,270,613	-				-0.7
4,270,683	-				+1.0
4,270,688	-				+0.3
4,270,698	+				+1.0
4,270,952	+				+1.0
4,270,952	+				-0.8
4,270,952	+				+1.1
4,270,952	+				+0.2
4,270,953	+				-0.2
4,270,954	-				+0.7
4,270,960	-				+1.8
4,270,960	-				+0.7
4,270,960	-				-0.5
4,270,971	-				+0.5
4,271,065	+		Shewana3_3562	0.19	+0.0
4,271,073	-		Shewana3_3562	0.20	+0.5
4,271,073	-		Shewana3_3562	0.20	-0.3
4,271,073	-		Shewana3_3562	0.20	+1.0
4,271,075	+		Shewana3_3562	0.20	+0.1
4,271,115	+		Shewana3_3562	0.25	+0.8
4,271,156	+		Shewana3_3562	0.30	-0.6
4,271,264	-		Shewana3_3562	0.42	-0.7
4,271,309	-		Shewana3_3562	0.48	-0.1
4,271,311	+		Shewana3_3562	0.48	+0.0
4,271,336	+		Shewana3_3562	0.51	-0.6
4,271,482	+		Shewana3_3562	0.68	-0.5
4,271,502	+		Shewana3_3562	0.71	-0.1
4,271,579	-		Shewana3_3562	0.80	-0.5
4,271,594	-		Shewana3_3562	0.81	+0.2
4,271,596	-		Shewana3_3562	0.82	-1.5
4,271,630	+		Shewana3_3562	0.86	-0.2
4,271,733	-				-0.3
4,271,734	-				+1.8