Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3469

Experiment: Carbon source Sucrose 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Sucrose 5 mM
4,158,503	-				-0.2
4,158,505	+				+0.9
4,158,836	+		Shewana3_3468	0.41	-0.6
4,158,886	+		Shewana3_3468	0.49	-0.4
4,158,901	-		Shewana3_3468	0.51	+0.3
4,158,929	+		Shewana3_3468	0.55	-0.4
4,158,987	+		Shewana3_3468	0.64	-0.2
4,159,000	+		Shewana3_3468	0.66	+0.4
4,159,000	+		Shewana3_3468	0.66	+0.3
4,159,083	+		Shewana3_3468	0.78	-1.2
4,159,124	+		Shewana3_3468	0.84	+0.7
4,159,131	+		Shewana3_3468	0.86	-0.4
4,159,360	+				+0.2
4,159,360	+				+0.4
4,159,418	+				+1.0
4,159,609	+		Shewana3_3469	0.11	-0.5
4,159,617	-		Shewana3_3469	0.11	+0.7
4,159,990	-		Shewana3_3469	0.28	+0.2
4,159,990	-		Shewana3_3469	0.28	+0.5
4,160,040	+		Shewana3_3469	0.30	-0.1
4,160,048	-		Shewana3_3469	0.30	+0.8
4,160,050	+		Shewana3_3469	0.30	-0.7
4,160,076	+		Shewana3_3469	0.31	+0.0
4,160,076	+		Shewana3_3469	0.31	+0.1
4,160,084	-		Shewana3_3469	0.32	+0.1
4,160,084	-		Shewana3_3469	0.32	-0.1
4,160,132	+		Shewana3_3469	0.34	+0.0
4,160,132	+		Shewana3_3469	0.34	-2.1
4,160,140	-		Shewana3_3469	0.34	-0.1
4,160,195	-		Shewana3_3469	0.37	-1.4
4,160,477	+		Shewana3_3469	0.49	-1.2
4,160,485	-		Shewana3_3469	0.49	+0.1
4,160,517	+		Shewana3_3469	0.51	+0.9
4,160,532	+		Shewana3_3469	0.51	+0.3
4,160,558	+		Shewana3_3469	0.53	+0.1
4,160,566	-		Shewana3_3469	0.53	-0.5
4,160,630	-		Shewana3_3469	0.56	+0.2
4,160,661	+		Shewana3_3469	0.57	-0.7
4,161,024	+		Shewana3_3469	0.73	-0.3
4,161,040	-		Shewana3_3469	0.74	+0.8
4,161,133	-		Shewana3_3469	0.78	-0.2
4,161,175	-		Shewana3_3469	0.80	+0.1
4,161,245	-		Shewana3_3469	0.83	+0.8
4,161,263	-		Shewana3_3469	0.84	+0.5
4,161,337	+		Shewana3_3469	0.87	+0.1
4,161,622	+				+0.4
4,161,859	+				+0.5
4,162,026	+		Shewana3_3470	0.21	+0.1
4,162,026	-		Shewana3_3470	0.21	-0.3
4,162,120	-		Shewana3_3470	0.32	+0.2
4,162,150	+		Shewana3_3470	0.35	-1.9
4,162,150	+		Shewana3_3470	0.35	-0.8
4,162,266	+		Shewana3_3470	0.48	-0.7
4,162,273	+		Shewana3_3470	0.48	+0.2
4,162,281	-		Shewana3_3470	0.49	-0.5
4,162,375	+		Shewana3_3470	0.60	-1.0
4,162,531	+		Shewana3_3470	0.77	+0.7
4,162,541	-		Shewana3_3470	0.78	-0.0
4,162,621	+		Shewana3_3470	0.87	-0.1