Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3279

Experiment: Carbon source Sucrose 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Sucrose 5 mM
3,917,953	-	cobT	Shewana3_3278	0.25	+0.3
3,917,981	+	cobT	Shewana3_3278	0.28	-0.2
3,918,161	+	cobT	Shewana3_3278	0.45	-0.9
3,918,205	+	cobT	Shewana3_3278	0.49	+1.0
3,918,213	-	cobT	Shewana3_3278	0.50	-1.4
3,918,299	-	cobT	Shewana3_3278	0.58	-0.1
3,918,314	-	cobT	Shewana3_3278	0.59	+0.3
3,918,314	-	cobT	Shewana3_3278	0.59	-0.1
3,918,314	-	cobT	Shewana3_3278	0.59	-1.1
3,918,314	-	cobT	Shewana3_3278	0.59	+0.3
3,918,314	-	cobT	Shewana3_3278	0.59	+0.7
3,918,477	+	cobT	Shewana3_3278	0.75	-0.8
3,918,485	-	cobT	Shewana3_3278	0.75	+0.2
3,918,514	+	cobT	Shewana3_3278	0.78	-1.6
3,918,733	+				+1.0
3,918,741	-				-0.6
3,919,107	-		Shewana3_3279	0.18	-0.9
3,919,219	-		Shewana3_3279	0.27	-0.1
3,919,226	-		Shewana3_3279	0.28	-1.0
3,919,226	-		Shewana3_3279	0.28	+0.6
3,919,418	-		Shewana3_3279	0.45	+1.6
3,919,432	-		Shewana3_3279	0.46	-1.3
3,919,478	+		Shewana3_3279	0.50	-1.7
3,919,626	-		Shewana3_3279	0.63	-0.1
3,919,636	+		Shewana3_3279	0.64	-0.6
3,919,747	+		Shewana3_3279	0.73	+0.4
3,919,760	-		Shewana3_3279	0.75	-1.4
3,919,789	-		Shewana3_3279	0.77	-0.4
3,919,789	-		Shewana3_3279	0.77	-0.1
3,919,807	+		Shewana3_3279	0.79	-0.2
3,919,902	+		Shewana3_3279	0.87	-0.8
3,919,949	+				-0.7
3,920,033	+				+0.1
3,920,033	+				-0.4
3,920,033	+				-0.8
3,920,033	+				+0.2
3,920,033	+				+0.4
3,920,041	-				+0.2
3,920,041	-				-0.1
3,920,055	-				+0.2
3,920,344	-		Shewana3_3280	0.30	+0.2
3,920,344	-		Shewana3_3280	0.30	-0.1
3,920,344	-		Shewana3_3280	0.30	+0.3
3,920,344	-		Shewana3_3280	0.30	-1.0
3,920,419	+		Shewana3_3280	0.38	-0.2
3,920,419	+		Shewana3_3280	0.38	-0.4
3,920,427	-		Shewana3_3280	0.39	-0.7
3,920,427	-		Shewana3_3280	0.39	-1.1
3,920,581	+		Shewana3_3280	0.54	-0.4
3,920,589	-		Shewana3_3280	0.55	+1.1
3,920,589	-		Shewana3_3280	0.55	-0.1
3,920,593	+		Shewana3_3280	0.56	-2.9
3,920,601	-		Shewana3_3280	0.56	-0.5
3,920,729	-		Shewana3_3280	0.69	+0.2
3,920,804	+		Shewana3_3280	0.77	-0.6
3,920,827	+		Shewana3_3280	0.79	-1.0
3,920,835	-		Shewana3_3280	0.80	-0.6
3,920,872	+		Shewana3_3280	0.84	+0.1
3,920,992	-				+0.7