Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3277

Experiment: Carbon source Sucrose 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Sucrose 5 mM
3,915,888	-		Shewana3_3275	0.86	+0.7
3,915,890	+		Shewana3_3275	0.86	-0.6
3,916,004	-				-3.0
3,916,046	-				+0.2
3,916,134	-				+0.1
3,916,416	+		Shewana3_3276	0.35	-0.8
3,916,416	+		Shewana3_3276	0.35	+0.2
3,916,498	-		Shewana3_3276	0.48	+0.7
3,916,536	+		Shewana3_3276	0.55	+0.9
3,916,631	+		Shewana3_3276	0.70	+0.1
3,916,651	+		Shewana3_3276	0.74	+0.1
3,916,821	-				+0.4
3,916,940	-	cobS	Shewana3_3277	0.17	-0.6
3,916,940	-	cobS	Shewana3_3277	0.17	-1.3
3,916,983	-	cobS	Shewana3_3277	0.22	-1.3
3,916,983	-	cobS	Shewana3_3277	0.22	-1.1
3,917,022	-	cobS	Shewana3_3277	0.27	+0.4
3,917,129	+	cobS	Shewana3_3277	0.41	+0.6
3,917,175	-	cobS	Shewana3_3277	0.47	+0.2
3,917,249	+	cobS	Shewana3_3277	0.56	-1.7
3,917,359	+	cobS	Shewana3_3277	0.70	-0.8
3,917,364	+	cobS	Shewana3_3277	0.71	-1.2
3,917,367	-	cobS	Shewana3_3277	0.71	-0.3
3,917,376	-	cobS	Shewana3_3277	0.72	-0.3
3,917,411	-	cobS	Shewana3_3277	0.77	-0.2
3,917,428	+	cobS	Shewana3_3277	0.79	-0.8
3,917,512	-	cobS	Shewana3_3277	0.89	-0.4
3,917,780	-				+0.1
3,917,953	-	cobT	Shewana3_3278	0.25	+0.3
3,917,981	+	cobT	Shewana3_3278	0.28	-0.2
3,918,161	+	cobT	Shewana3_3278	0.45	-0.9
3,918,205	+	cobT	Shewana3_3278	0.49	+1.0
3,918,213	-	cobT	Shewana3_3278	0.50	-1.4
3,918,299	-	cobT	Shewana3_3278	0.58	-0.1
3,918,314	-	cobT	Shewana3_3278	0.59	+0.3
3,918,314	-	cobT	Shewana3_3278	0.59	-0.1
3,918,314	-	cobT	Shewana3_3278	0.59	-1.1
3,918,314	-	cobT	Shewana3_3278	0.59	+0.3
3,918,314	-	cobT	Shewana3_3278	0.59	+0.7
3,918,477	+	cobT	Shewana3_3278	0.75	-0.8
3,918,485	-	cobT	Shewana3_3278	0.75	+0.2
3,918,514	+	cobT	Shewana3_3278	0.78	-1.6