Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2603

Experiment: Carbon source Sucrose 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Sucrose 5 mM
3,105,109	-		Shewana3_2601	0.38	+0.1
3,105,114	-		Shewana3_2601	0.39	-0.8
3,105,138	-		Shewana3_2601	0.46	-1.7
3,105,226	-		Shewana3_2601	0.71	+0.5
3,105,602	-	nrdG	Shewana3_2602	0.32	-0.8
3,105,667	+	nrdG	Shewana3_2602	0.46	+0.3
3,105,668	+	nrdG	Shewana3_2602	0.46	-0.7
3,105,812	+	nrdG	Shewana3_2602	0.77	-0.1
3,105,859	-	nrdG	Shewana3_2602	0.87	-0.6
3,106,129	-				+0.0
3,106,286	+		Shewana3_2603	0.12	-0.2
3,106,286	+		Shewana3_2603	0.12	+0.8
3,106,301	-		Shewana3_2603	0.13	+0.0
3,106,395	+		Shewana3_2603	0.18	+0.3
3,106,567	+		Shewana3_2603	0.26	-0.5
3,106,567	+		Shewana3_2603	0.26	+0.0
3,107,087	-		Shewana3_2603	0.50	+0.6
3,107,126	+		Shewana3_2603	0.52	+0.2
3,107,134	-		Shewana3_2603	0.52	-0.7
3,107,248	-		Shewana3_2603	0.58	-0.6
3,107,313	-		Shewana3_2603	0.61	+0.7
3,107,464	+		Shewana3_2603	0.68	-0.2
3,107,514	-		Shewana3_2603	0.70	+0.5
3,107,519	-		Shewana3_2603	0.71	+1.1
3,107,529	-		Shewana3_2603	0.71	-1.0
3,107,576	+		Shewana3_2603	0.73	+0.5
3,107,686	-		Shewana3_2603	0.79	-1.3
3,107,722	+		Shewana3_2603	0.80	+0.3
3,107,730	-		Shewana3_2603	0.81	+0.9
3,107,820	-		Shewana3_2603	0.85	+1.4
3,107,825	-		Shewana3_2603	0.85	-0.4
3,108,041	+				-0.1
3,108,142	+				+2.0
3,108,390	-				-0.5
3,108,532	-				+0.8
3,108,596	+		Shewana3_2604	0.12	+0.2
3,108,604	-		Shewana3_2604	0.14	+0.2
3,108,625	-		Shewana3_2604	0.17	-1.2
3,108,635	+		Shewana3_2604	0.18	+0.1
3,108,706	-		Shewana3_2604	0.28	-0.1
3,108,762	-		Shewana3_2604	0.36	-0.0
3,108,816	+		Shewana3_2604	0.44	-0.3
3,109,116	-		Shewana3_2604	0.87	+0.6