Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1859

Experiment: Carbon source Sucrose 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Sucrose 5 mM
2,199,169	-		Shewana3_1857	0.39	-1.6
2,199,203	+		Shewana3_1857	0.48	-0.5
2,199,203	+		Shewana3_1857	0.48	+0.4
2,199,208	+		Shewana3_1857	0.49	-0.4
2,199,211	-		Shewana3_1857	0.50	-0.2
2,199,224	+		Shewana3_1857	0.53	-0.3
2,199,242	-		Shewana3_1857	0.58	+0.4
2,199,242	-		Shewana3_1857	0.58	+1.1
2,199,242	-		Shewana3_1857	0.58	+1.1
2,199,242	-		Shewana3_1857	0.58	+0.1
2,199,246	+		Shewana3_1857	0.59	+0.3
2,199,254	-		Shewana3_1857	0.61	+0.6
2,199,269	+		Shewana3_1857	0.65	+0.3
2,199,277	-		Shewana3_1857	0.67	+0.1
2,199,290	-		Shewana3_1857	0.70	+0.2
2,199,361	+		Shewana3_1857	0.89	+0.3
2,199,385	+				-0.5
2,199,508	-				-0.7
2,199,508	-				-1.0
2,199,524	+				+0.4
2,199,541	+				-0.3
2,199,570	-				+1.2
2,199,842	-		Shewana3_1858	0.82	+0.4
2,199,929	-				+0.3
2,200,044	-				-0.7
2,200,068	+				-0.9
2,200,240	+				-0.5
2,200,240	+				-0.0
2,200,240	+				+0.1
2,200,248	-				-2.4
2,200,248	-				-0.1
2,200,528	+		Shewana3_1859	0.18	+0.5
2,200,536	-		Shewana3_1859	0.19	+1.1
2,200,587	-		Shewana3_1859	0.21	-0.8
2,200,649	-		Shewana3_1859	0.24	-2.0
2,200,758	+		Shewana3_1859	0.30	-1.2
2,200,770	+		Shewana3_1859	0.30	-0.7
2,200,770	+		Shewana3_1859	0.30	-0.3
2,200,770	+		Shewana3_1859	0.30	-0.1
2,200,778	-		Shewana3_1859	0.31	-0.7
2,200,778	-		Shewana3_1859	0.31	-0.0
2,200,793	-		Shewana3_1859	0.31	-0.6
2,200,978	+		Shewana3_1859	0.40	+0.2
2,201,020	-		Shewana3_1859	0.42	-0.8
2,201,070	+		Shewana3_1859	0.45	-1.3
2,201,127	+		Shewana3_1859	0.48	+0.1
2,201,192	+		Shewana3_1859	0.51	-0.2
2,201,192	+		Shewana3_1859	0.51	-0.3
2,201,252	+		Shewana3_1859	0.54	-0.6
2,201,487	+		Shewana3_1859	0.66	+0.8
2,201,622	+		Shewana3_1859	0.72	-0.1
2,201,679	+		Shewana3_1859	0.75	-0.8
2,201,850	+		Shewana3_1859	0.83	-0.7
2,201,878	-		Shewana3_1859	0.85	-0.6
2,202,012	+				+0.3
2,202,101	-				-0.8
2,202,106	-				+0.8
2,202,429	+		Shewana3_1860	0.36	+0.6
2,202,455	-		Shewana3_1860	0.41	+1.8
2,202,485	+		Shewana3_1860	0.47	-0.7
2,202,575	+		Shewana3_1860	0.64	-0.2
2,202,689	-		Shewana3_1860	0.86	-1.2
2,202,805	+				-0.9
2,202,813	-				-0.1
2,202,941	-				-0.1
2,203,039	+		Shewana3_1861	0.11	-0.9
2,203,096	+		Shewana3_1861	0.14	+1.3
2,203,156	+		Shewana3_1861	0.17	+0.0
2,203,176	-		Shewana3_1861	0.18	-0.6