Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1853

Experiment: Carbon source Sucrose 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Sucrose 5 mM
2,193,894	-		Shewana3_1852	0.29	-4.3
2,194,184	+		Shewana3_1852	0.53	-5.9
2,194,252	+		Shewana3_1852	0.58	-3.9
2,194,252	+		Shewana3_1852	0.58	-4.4
2,194,260	-		Shewana3_1852	0.59	-5.9
2,194,567	+		Shewana3_1852	0.84	-4.4
2,194,647	-				-0.8
2,194,654	-				-4.0
2,194,721	+				-3.1
2,194,729	-				-4.8
2,194,749	-				-1.5
2,194,797	-				-3.6
2,194,798	-				-1.4
2,195,272	+	hisD	Shewana3_1853	0.35	-3.5
2,195,369	-	hisD	Shewana3_1853	0.42	-4.3
2,195,825	+	hisD	Shewana3_1853	0.77	-4.2
2,195,825	+	hisD	Shewana3_1853	0.77	-5.4
2,195,924	-	hisD	Shewana3_1853	0.85	-5.2
2,196,027	-				-4.4
2,196,195	-				-1.3
2,196,195	-				-1.3
2,196,195	-				-0.4
2,196,380	+	hisG	Shewana3_1854	0.28	-2.8
2,196,380	+	hisG	Shewana3_1854	0.28	-1.5
2,196,398	-	hisG	Shewana3_1854	0.30	-3.8
2,196,444	-	hisG	Shewana3_1854	0.35	-4.5
2,196,446	+	hisG	Shewana3_1854	0.36	-3.5
2,196,475	+	hisG	Shewana3_1854	0.39	-4.4
2,196,966	-				-2.7
2,196,996	+				-4.8
2,197,026	+				-4.2