Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1746

Experiment: Carbon source Sucrose 5 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntShewana3_1745 and Shewana3_1746 are separated by 29 nucleotidesShewana3_1746 and mnmA are separated by 3 nucleotides Shewana3_1745: Shewana3_1745 - adenylosuccinate lyase (RefSeq), at 2,058,797 to 2,060,167 _1745 Shewana3_1746: Shewana3_1746 - hypothetical protein (RefSeq), at 2,060,197 to 2,060,814 _1746 Shewana3_1747: mnmA - tRNA-specific 2-thiouridylase MnmA (RefSeq), at 2,060,818 to 2,061,936 mnmA Position (kb) 2060 2061Strain fitness (log2 ratio) -1 0 1at 2060.625 kb on - strand, within Shewana3_1746at 2060.642 kb on - strand, within Shewana3_1746at 2060.647 kb on - strand, within Shewana3_1746

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Per-strain Table

Position Strand Gene LocusTag Fraction Carbon source Sucrose 5 mM
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2,060,625 - Shewana3_1746 0.69 -1.7
2,060,642 - Shewana3_1746 0.72 -1.4
2,060,647 - Shewana3_1746 0.73 -1.4

Or see this region's nucleotide sequence