Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1745
Experiment: Carbon source Sucrose 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Carbon source Sucrose 5 mM |
---|---|---|---|---|---|
remove | |||||
2,057,822 | + | Shewana3_1744 | 0.26 | +0.9 | |
2,057,934 | - | Shewana3_1744 | 0.35 | +0.3 | |
2,057,987 | + | Shewana3_1744 | 0.40 | -3.4 | |
2,057,996 | - | Shewana3_1744 | 0.41 | -0.1 | |
2,058,094 | + | Shewana3_1744 | 0.49 | +0.9 | |
2,058,104 | - | Shewana3_1744 | 0.50 | +0.5 | |
2,058,246 | - | Shewana3_1744 | 0.63 | -0.8 | |
2,058,485 | - | Shewana3_1744 | 0.84 | -0.2 | |
2,058,559 | + | +0.4 | |||
2,060,625 | - | Shewana3_1746 | 0.69 | -1.7 | |
2,060,642 | - | Shewana3_1746 | 0.72 | -1.4 | |
2,060,647 | - | Shewana3_1746 | 0.73 | -1.4 |
Or see this region's nucleotide sequence