Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1439
Experiment: Carbon source Sucrose 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Carbon source Sucrose 5 mM |
---|---|---|---|---|---|
remove | |||||
1,667,877 | + | secF | Shewana3_1438 | 0.23 | +0.9 |
1,667,959 | + | secF | Shewana3_1438 | 0.31 | +0.3 |
1,668,257 | + | secF | Shewana3_1438 | 0.63 | +0.3 |
1,668,828 | - | -0.3 | |||
1,669,109 | + | Shewana3_1439 | 0.77 | -1.4 | |
1,669,332 | - | -0.7 | |||
1,669,463 | - | -2.6 | |||
1,669,489 | - | Shewana3_1440 | 0.10 | +1.1 | |
1,669,636 | + | Shewana3_1440 | 0.51 | +0.4 | |
1,669,995 | + | Shewana3_1441 | 0.16 | -1.1 |
Or see this region's nucleotide sequence