Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1377

Experiment: Carbon source Sucrose 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Sucrose 5 mM
1,591,737	+				-2.7
1,592,210	-		Shewana3_1376	0.56	-3.7
1,592,631	+				-0.0
1,592,668	-				-2.6
1,592,885	+		Shewana3_1377	0.22	-1.8
1,592,922	+		Shewana3_1377	0.25	-0.4
1,593,007	+		Shewana3_1377	0.34	-2.3
1,593,007	+		Shewana3_1377	0.34	-2.1
1,593,009	+		Shewana3_1377	0.34	-0.4
1,593,125	+		Shewana3_1377	0.46	-0.6
1,593,125	+		Shewana3_1377	0.46	+1.2
1,593,125	+		Shewana3_1377	0.46	+0.2
1,593,139	+		Shewana3_1377	0.47	-2.2
1,593,155	+		Shewana3_1377	0.49	-2.9
1,593,184	+		Shewana3_1377	0.52	-2.0
1,593,184	+		Shewana3_1377	0.52	-1.9
1,593,214	+		Shewana3_1377	0.55	-1.7
1,593,214	+		Shewana3_1377	0.55	-1.7
1,593,219	+		Shewana3_1377	0.55	-3.9
1,593,219	+		Shewana3_1377	0.55	-1.9
1,593,219	+		Shewana3_1377	0.55	+0.6
1,593,280	+		Shewana3_1377	0.62	-1.5
1,593,483	+		Shewana3_1377	0.82	-1.3
1,593,483	+		Shewana3_1377	0.82	+0.6
1,593,483	+		Shewana3_1377	0.82	-1.2
1,593,483	+		Shewana3_1377	0.82	-0.6
1,593,483	+		Shewana3_1377	0.82	-0.9
1,593,491	+		Shewana3_1377	0.83	-2.0
1,593,493	+		Shewana3_1377	0.83	-0.4
1,593,501	+		Shewana3_1377	0.84	-0.2
1,593,529	+		Shewana3_1377	0.87	-1.1
1,593,660	+				-0.9
1,593,697	+				-1.6
1,593,697	+				-1.1
1,593,697	+				-1.9
1,593,697	+				-0.2
1,593,697	+				-2.2
1,593,697	+				-0.6
1,593,697	+				-1.1
1,593,727	+				-1.6
1,593,826	+		Shewana3_1378	0.22	-0.9
1,593,834	-		Shewana3_1378	0.23	-1.6
1,593,837	+		Shewana3_1378	0.24	-1.0
1,593,888	+		Shewana3_1378	0.30	-2.1
1,593,946	+		Shewana3_1378	0.38	-1.7
1,594,010	+		Shewana3_1378	0.47	-2.0
1,594,018	+		Shewana3_1378	0.48	-1.7
1,594,123	+		Shewana3_1378	0.62	-1.2
1,594,125	+		Shewana3_1378	0.62	-2.0
1,594,125	+		Shewana3_1378	0.62	-1.8
1,594,125	+		Shewana3_1378	0.62	-0.2
1,594,125	+		Shewana3_1378	0.62	-2.4
1,594,125	+		Shewana3_1378	0.62	-1.0
1,594,125	+		Shewana3_1378	0.62	-0.7
1,594,125	+		Shewana3_1378	0.62	-1.1
1,594,125	+		Shewana3_1378	0.62	-1.5
1,594,125	+		Shewana3_1378	0.62	-1.3
1,594,125	+		Shewana3_1378	0.62	-0.4
1,594,125	+		Shewana3_1378	0.62	-1.4
1,594,133	-		Shewana3_1378	0.63	-1.6
1,594,133	-		Shewana3_1378	0.63	-1.4
1,594,149	+		Shewana3_1378	0.65	-1.4
1,594,180	+		Shewana3_1378	0.69	-0.8
1,594,184	+		Shewana3_1378	0.70	-1.0
1,594,185	+		Shewana3_1378	0.70	-2.4
1,594,185	+		Shewana3_1378	0.70	-0.6
1,594,186	+		Shewana3_1378	0.70	-1.4
1,594,217	+		Shewana3_1378	0.74	-1.3
1,594,226	+		Shewana3_1378	0.75	-2.8
1,594,226	+		Shewana3_1378	0.75	-0.5
1,594,226	+		Shewana3_1378	0.75	-1.9
1,594,226	+		Shewana3_1378	0.75	-1.0
1,594,321	+		Shewana3_1378	0.88	-0.6
1,594,321	+		Shewana3_1378	0.88	-1.3
1,594,380	+				-1.0