Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1270

Experiment: Carbon source Sucrose 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Sucrose 5 mM
1,482,920	+				-0.9
1,482,927	+				-0.8
1,482,929	-				+0.7
1,483,153	+		Shewana3_1269	0.13	-0.4
1,483,180	-		Shewana3_1269	0.16	-0.0
1,483,296	+		Shewana3_1269	0.31	+0.5
1,483,410	+		Shewana3_1269	0.45	+0.5
1,483,452	+		Shewana3_1269	0.51	+0.4
1,483,593	+		Shewana3_1269	0.68	+0.3
1,483,625	+		Shewana3_1269	0.72	-0.1
1,483,687	+		Shewana3_1269	0.80	-0.1
1,483,773	+				+0.8
1,484,336	-		Shewana3_1270	0.29	+1.0
1,484,336	-		Shewana3_1270	0.29	-0.2
1,484,544	+		Shewana3_1270	0.43	+0.7
1,484,544	+		Shewana3_1270	0.43	-0.4
1,484,552	-		Shewana3_1270	0.43	+0.1
1,484,582	+		Shewana3_1270	0.45	-0.2
1,484,592	+		Shewana3_1270	0.46	+0.6
1,484,600	-		Shewana3_1270	0.46	-0.2
1,484,611	+		Shewana3_1270	0.47	+0.7
1,484,649	-		Shewana3_1270	0.50	-0.6
1,484,649	-		Shewana3_1270	0.50	-0.7
1,484,649	-		Shewana3_1270	0.50	-0.4
1,484,811	+		Shewana3_1270	0.61	-3.2
1,484,900	+		Shewana3_1270	0.67	-1.3
1,484,961	+		Shewana3_1270	0.71	-1.2
1,484,967	-		Shewana3_1270	0.71	-0.3
1,485,047	+		Shewana3_1270	0.76	-1.1
1,485,095	+		Shewana3_1270	0.80	-0.8
1,485,103	-		Shewana3_1270	0.80	+0.3
1,485,105	+		Shewana3_1270	0.80	-0.1
1,485,191	-		Shewana3_1270	0.86	+0.5
1,485,295	+				+0.5
1,485,529	+		Shewana3_1271	0.43	-0.6
1,485,529	+		Shewana3_1271	0.43	+0.8
1,485,675	-				-0.3
1,485,747	-		Shewana3_1272	0.24	+0.4
1,485,894	-				+0.2
1,485,942	+				-0.2
1,485,957	+				-0.6
1,485,967	+				-0.0
1,485,989	+				+0.2
1,486,008	-				+0.1
1,486,010	+				-0.1
1,486,018	-		Shewana3_1273	0.12	+0.6
1,486,077	+		Shewana3_1273	0.42	-0.3
1,486,086	-		Shewana3_1273	0.47	+0.2
1,486,334	-		Shewana3_1274	0.28	+0.2
1,486,359	-		Shewana3_1274	0.35	-0.8
1,486,359	-		Shewana3_1274	0.35	+0.4