Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1119
Experiment: Carbon source Sucrose 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Carbon source Sucrose 5 mM |
---|---|---|---|---|---|
remove | |||||
1,318,727 | + | -0.4 | |||
1,318,941 | - | Shewana3_1120 | 0.15 | -1.0 | |
1,319,026 | - | Shewana3_1120 | 0.23 | -2.8 | |
1,319,066 | + | Shewana3_1120 | 0.27 | -1.1 | |
1,319,074 | - | Shewana3_1120 | 0.27 | -2.0 | |
1,319,146 | + | Shewana3_1120 | 0.34 | -0.9 | |
1,319,262 | + | Shewana3_1120 | 0.44 | +0.1 | |
1,319,331 | + | Shewana3_1120 | 0.50 | +0.1 | |
1,319,333 | + | Shewana3_1120 | 0.50 | +0.5 | |
1,319,350 | + | Shewana3_1120 | 0.52 | +0.0 | |
1,319,584 | + | Shewana3_1120 | 0.72 | -1.0 |
Or see this region's nucleotide sequence