Strain Fitness in Shewanella sp. ANA-3 around Shewana3_0965
Experiment: Carbon source Sucrose 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Carbon source Sucrose 5 mM |
---|---|---|---|---|---|
remove | |||||
1,131,766 | + | Shewana3_0964 | 0.28 | +0.4 | |
1,131,771 | + | Shewana3_0964 | 0.28 | -0.9 | |
1,131,854 | + | Shewana3_0964 | 0.38 | +0.9 | |
1,131,952 | + | Shewana3_0964 | 0.50 | +0.3 | |
1,132,029 | + | Shewana3_0964 | 0.60 | +0.0 | |
1,132,029 | + | Shewana3_0964 | 0.60 | -0.8 | |
1,132,107 | + | Shewana3_0964 | 0.70 | +1.0 | |
1,132,115 | - | Shewana3_0964 | 0.71 | -0.6 | |
1,132,117 | + | Shewana3_0964 | 0.71 | -1.2 | |
1,132,140 | - | Shewana3_0964 | 0.74 | -0.4 | |
1,132,174 | + | Shewana3_0964 | 0.78 | +0.8 | |
1,132,745 | + | Shewana3_0965 | 0.32 | -2.0 | |
1,132,760 | + | Shewana3_0965 | 0.35 | -2.1 | |
1,132,827 | + | Shewana3_0965 | 0.46 | -1.1 | |
1,132,955 | - | Shewana3_0965 | 0.66 | +0.0 | |
1,132,957 | + | Shewana3_0965 | 0.67 | +0.0 | |
1,133,049 | + | Shewana3_0965 | 0.82 | +0.9 | |
1,133,218 | + | +0.5 |
Or see this region's nucleotide sequence