Strain Fitness in Shewanella sp. ANA-3 around Shewana3_0928

Experiment: Carbon source Sucrose 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Sucrose 5 mM
1,083,240	+		Shewana3_0927	0.10	+0.0
1,083,254	-		Shewana3_0927	0.11	+0.0
1,083,311	-		Shewana3_0927	0.17	-0.0
1,083,365	-		Shewana3_0927	0.22	+0.1
1,083,421	+		Shewana3_0927	0.28	+0.2
1,083,429	-		Shewana3_0927	0.29	-0.0
1,083,488	+		Shewana3_0927	0.35	-0.3
1,083,498	+		Shewana3_0927	0.36	+0.1
1,083,533	+		Shewana3_0927	0.39	+0.1
1,083,578	+		Shewana3_0927	0.44	-0.4
1,083,637	+		Shewana3_0927	0.49	-0.4
1,083,637	+		Shewana3_0927	0.49	-0.3
1,083,817	-		Shewana3_0927	0.67	-1.1
1,083,902	+		Shewana3_0927	0.76	+0.2
1,083,945	+		Shewana3_0927	0.80	-0.5
1,084,017	-		Shewana3_0927	0.87	+1.4
1,084,087	+				+0.1
1,084,087	+				+0.1
1,084,093	-				-0.6
1,084,220	+				+0.9
1,084,335	-				-1.5
1,084,337	-		Shewana3_0928	0.10	+0.0
1,084,451	-		Shewana3_0928	0.19	-0.7
1,084,489	-		Shewana3_0928	0.21	-0.0
1,084,508	-		Shewana3_0928	0.23	+0.9
1,084,551	-		Shewana3_0928	0.26	-1.4
1,084,553	-		Shewana3_0928	0.26	-2.8
1,084,646	-		Shewana3_0928	0.33	+0.3
1,084,672	-		Shewana3_0928	0.35	+0.4
1,085,068	-		Shewana3_0928	0.65	+0.8
1,085,069	+		Shewana3_0928	0.65	+0.4
1,085,071	+		Shewana3_0928	0.65	-0.6
1,085,077	-		Shewana3_0928	0.65	-0.5
1,085,077	-		Shewana3_0928	0.65	-0.3
1,085,148	-		Shewana3_0928	0.71	-1.0
1,085,239	+		Shewana3_0928	0.77	+0.0
1,085,257	-		Shewana3_0928	0.79	-0.2
1,085,259	-		Shewana3_0928	0.79	-2.1
1,085,316	+		Shewana3_0928	0.83	-0.6
1,085,452	+				-0.8
1,085,625	+				+0.4
1,085,633	-				-0.7
1,085,782	+				-0.2
1,085,811	-				-0.3
1,085,824	-				+0.8
1,086,216	-		Shewana3_0929	0.37	-0.7
1,086,310	+		Shewana3_0929	0.44	+0.7
1,086,371	+		Shewana3_0929	0.48	-0.4
1,086,502	-		Shewana3_0929	0.58	-0.0