Strain Fitness in Shewanella sp. ANA-3 around Shewana3_0913

Experiment: Carbon source Sucrose 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Sucrose 5 mM
1,064,488	+		Shewana3_0912	0.48	+0.2
1,064,490	+		Shewana3_0912	0.48	+0.3
1,064,724	-		Shewana3_0912	0.68	-0.1
1,064,783	+		Shewana3_0912	0.73	-0.3
1,064,783	+		Shewana3_0912	0.73	+0.2
1,064,783	+		Shewana3_0912	0.73	+0.1
1,064,783	+		Shewana3_0912	0.73	+1.0
1,064,783	+		Shewana3_0912	0.73	-0.8
1,064,783	+		Shewana3_0912	0.73	-0.1
1,064,783	+		Shewana3_0912	0.73	-0.5
1,064,783	+		Shewana3_0912	0.73	-0.6
1,064,783	+		Shewana3_0912	0.73	-0.0
1,064,783	+		Shewana3_0912	0.73	-0.0
1,064,783	+		Shewana3_0912	0.73	+0.6
1,064,783	+		Shewana3_0912	0.73	-0.2
1,064,791	-		Shewana3_0912	0.74	+0.1
1,064,791	-		Shewana3_0912	0.74	-0.1
1,064,791	-		Shewana3_0912	0.74	-0.3
1,064,791	-		Shewana3_0912	0.74	-0.3
1,064,801	-		Shewana3_0912	0.75	-0.0
1,064,809	+		Shewana3_0912	0.75	+0.8
1,065,107	-				-0.0
1,065,190	+				+0.4
1,065,190	+				+0.1
1,065,196	-				-0.7
1,065,497	-				+0.7
1,065,645	+		Shewana3_0913	0.14	-0.1
1,065,728	+		Shewana3_0913	0.18	+0.6
1,065,848	-		Shewana3_0913	0.24	-0.7
1,065,957	+		Shewana3_0913	0.29	-0.7
1,066,195	-		Shewana3_0913	0.40	+0.7
1,066,293	+		Shewana3_0913	0.44	+0.4
1,066,477	-		Shewana3_0913	0.53	+0.3
1,066,641	-		Shewana3_0913	0.60	+1.0
1,066,702	-		Shewana3_0913	0.63	+0.2
1,066,751	-		Shewana3_0913	0.65	-0.2
1,066,762	+		Shewana3_0913	0.66	+0.3
1,067,020	-		Shewana3_0913	0.78	+0.1
1,067,027	+		Shewana3_0913	0.78	+0.6
1,067,035	-		Shewana3_0913	0.79	-0.5
1,067,045	-		Shewana3_0913	0.79	+0.7
1,067,061	-		Shewana3_0913	0.80	+1.6
1,067,121	+		Shewana3_0913	0.83	-0.0
1,067,169	-		Shewana3_0913	0.85	-0.1
1,067,271	+		Shewana3_0913	0.90	-0.4
1,067,279	-		Shewana3_0913	0.90	-0.5
1,067,661	+				-0.5
1,067,700	-				+1.0
1,067,802	-				+0.9
1,067,821	-				-0.1
1,068,017	+				-0.7
1,068,018	+				+0.5
1,068,371	+				-0.2
1,068,372	+				-1.1
1,068,386	+				-0.4
1,068,386	+				+0.0
1,068,450	-				+0.4
1,068,486	+				+0.1