Strain Fitness in Shewanella sp. ANA-3 around Shewana3_0912

Experiment: Carbon source Sucrose 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Sucrose 5 mM
1,062,934	+		Shewana3_0910	0.71	+0.4
1,062,973	-		Shewana3_0910	0.73	-0.9
1,062,988	-		Shewana3_0910	0.75	+0.1
1,063,158	-		Shewana3_0910	0.86	+0.8
1,063,255	+				+0.6
1,063,255	+				+0.6
1,063,255	+				+0.9
1,063,255	+				-0.1
1,063,350	+				+0.3
1,063,368	-				+0.1
1,063,397	+				-0.2
1,063,593	+				-0.7
1,063,603	+				-0.1
1,063,694	+				+0.2
1,063,986	-				-0.7
1,064,061	-		Shewana3_0912	0.12	+0.4
1,064,078	+		Shewana3_0912	0.13	-0.2
1,064,154	-		Shewana3_0912	0.20	+0.7
1,064,294	+		Shewana3_0912	0.31	+0.3
1,064,317	+		Shewana3_0912	0.33	+0.2
1,064,488	+		Shewana3_0912	0.48	+0.2
1,064,490	+		Shewana3_0912	0.48	+0.3
1,064,724	-		Shewana3_0912	0.68	-0.1
1,064,783	+		Shewana3_0912	0.73	-0.3
1,064,783	+		Shewana3_0912	0.73	+0.2
1,064,783	+		Shewana3_0912	0.73	+0.1
1,064,783	+		Shewana3_0912	0.73	+1.0
1,064,783	+		Shewana3_0912	0.73	-0.8
1,064,783	+		Shewana3_0912	0.73	-0.1
1,064,783	+		Shewana3_0912	0.73	-0.5
1,064,783	+		Shewana3_0912	0.73	-0.6
1,064,783	+		Shewana3_0912	0.73	-0.0
1,064,783	+		Shewana3_0912	0.73	-0.0
1,064,783	+		Shewana3_0912	0.73	+0.6
1,064,783	+		Shewana3_0912	0.73	-0.2
1,064,791	-		Shewana3_0912	0.74	+0.1
1,064,791	-		Shewana3_0912	0.74	-0.1
1,064,791	-		Shewana3_0912	0.74	-0.3
1,064,791	-		Shewana3_0912	0.74	-0.3
1,064,801	-		Shewana3_0912	0.75	-0.0
1,064,809	+		Shewana3_0912	0.75	+0.8
1,065,107	-				-0.0
1,065,190	+				+0.4
1,065,190	+				+0.1
1,065,196	-				-0.7
1,065,497	-				+0.7
1,065,645	+		Shewana3_0913	0.14	-0.1
1,065,728	+		Shewana3_0913	0.18	+0.6
1,065,848	-		Shewana3_0913	0.24	-0.7
1,065,957	+		Shewana3_0913	0.29	-0.7