Strain Fitness in Shewanella sp. ANA-3 around Shewana3_0865

Experiment: Carbon source Sucrose 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Sucrose 5 mM
1,006,882	+	cysN	Shewana3_0864	0.36	-4.2
1,007,048	-	cysN	Shewana3_0864	0.48	-3.3
1,007,048	-	cysN	Shewana3_0864	0.48	-2.9
1,007,050	+	cysN	Shewana3_0864	0.48	-4.8
1,007,050	+	cysN	Shewana3_0864	0.48	-3.9
1,007,241	-	cysN	Shewana3_0864	0.61	-4.1
1,007,346	+	cysN	Shewana3_0864	0.69	-3.1
1,007,346	+	cysN	Shewana3_0864	0.69	-4.3
1,007,346	+	cysN	Shewana3_0864	0.69	-5.0
1,007,352	-	cysN	Shewana3_0864	0.69	-3.1
1,007,435	-	cysN	Shewana3_0864	0.75	-3.4
1,007,444	-	cysN	Shewana3_0864	0.75	-4.2
1,007,466	-	cysN	Shewana3_0864	0.77	-4.4
1,007,558	+	cysN	Shewana3_0864	0.83	-2.4
1,007,558	+	cysN	Shewana3_0864	0.83	-3.9
1,007,558	+	cysN	Shewana3_0864	0.83	-2.1
1,007,558	+	cysN	Shewana3_0864	0.83	-3.4
1,007,566	-	cysN	Shewana3_0864	0.84	-3.4
1,007,709	+				-3.9
1,008,105	-		Shewana3_0865	0.18	-4.7
1,008,117	-		Shewana3_0865	0.18	-2.3
1,008,347	+		Shewana3_0865	0.32	-3.3
1,008,425	-		Shewana3_0865	0.36	-2.9
1,008,434	-		Shewana3_0865	0.37	-3.9
1,008,509	+		Shewana3_0865	0.41	-2.6
1,008,599	+		Shewana3_0865	0.46	-2.4
1,008,717	-		Shewana3_0865	0.53	-5.1
1,008,725	+		Shewana3_0865	0.53	-2.9
1,008,883	-		Shewana3_0865	0.63	-4.4
1,008,883	-		Shewana3_0865	0.63	-4.3
1,008,977	+		Shewana3_0865	0.68	-2.6
1,008,998	+		Shewana3_0865	0.69	-2.4
1,009,019	-		Shewana3_0865	0.70	-3.5
1,009,019	-		Shewana3_0865	0.70	-4.1
1,009,019	-		Shewana3_0865	0.70	-4.3
1,009,043	+		Shewana3_0865	0.72	-2.9
1,009,128	-		Shewana3_0865	0.77	-5.6
1,009,129	-		Shewana3_0865	0.77	-4.5
1,009,171	+		Shewana3_0865	0.79	-2.4
1,009,724	-		Shewana3_0866	0.24	-3.9
1,009,860	+		Shewana3_0866	0.46	-2.4
1,009,912	+		Shewana3_0866	0.55	-2.8
1,009,990	+		Shewana3_0866	0.67	-3.1
1,010,182	-				-4.0
1,010,182	-				-1.5
1,010,182	-				-2.7
1,010,182	-				-3.4
1,010,189	-				-0.6
1,010,205	+				+0.9
1,010,229	+				-0.5
1,010,253	+				-0.4
1,010,322	+				-0.7
1,010,378	+		Shewana3_0867	0.10	-0.1
1,010,384	+		Shewana3_0867	0.11	-0.2
1,010,386	-		Shewana3_0867	0.11	+0.6
1,010,494	-		Shewana3_0867	0.16	+0.4