Experiment: Carbon source Sucrose 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shewana3_0856 and Shewana3_0857 overlap by 8 nucleotides Shewana3_0857 and Shewana3_0858 are separated by 676 nucleotides
Shewana3_0856: Shewana3_0856 - sulfite reductase subunit beta (RefSeq), at 995,254 to 996,951
_0856
Shewana3_0857: Shewana3_0857 - phosphoadenosine phosphosulfate reductase (RefSeq), at 996,944 to 997,741
_0857
Shewana3_0858: Shewana3_0858 - monofunctional biosynthetic peptidoglycan transglycosylase (RefSeq), at 998,418 to 999,203
_0858
Position (kb) 996
997
998 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 996.024 kb on + strand, within Shewana3_0856 at 996.146 kb on - strand, within Shewana3_0856 at 996.189 kb on + strand, within Shewana3_0856 at 996.210 kb on - strand, within Shewana3_0856 at 996.237 kb on + strand, within Shewana3_0856 at 996.287 kb on - strand, within Shewana3_0856 at 996.287 kb on - strand, within Shewana3_0856 at 996.340 kb on + strand, within Shewana3_0856 at 996.500 kb on + strand, within Shewana3_0856 at 996.500 kb on + strand, within Shewana3_0856 at 996.513 kb on - strand, within Shewana3_0856 at 996.538 kb on + strand, within Shewana3_0856 at 996.651 kb on - strand, within Shewana3_0856 at 996.745 kb on - strand, within Shewana3_0856 at 997.303 kb on + strand, within Shewana3_0857 at 997.303 kb on + strand, within Shewana3_0857 at 997.571 kb on + strand, within Shewana3_0857 at 998.035 kb on + strand at 998.035 kb on + strand at 998.176 kb on + strand at 998.219 kb on - strand at 998.239 kb on - strand at 998.259 kb on - strand at 998.334 kb on + strand at 998.690 kb on + strand, within Shewana3_0858
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source Sucrose 5 mM remove 996,024 + Shewana3_0856 0.45 -4.9 996,146 - Shewana3_0856 0.53 -4.5 996,189 + Shewana3_0856 0.55 -4.2 996,210 - Shewana3_0856 0.56 -5.4 996,237 + Shewana3_0856 0.58 -3.0 996,287 - Shewana3_0856 0.61 -0.9 996,287 - Shewana3_0856 0.61 -4.4 996,340 + Shewana3_0856 0.64 -2.7 996,500 + Shewana3_0856 0.73 -3.5 996,500 + Shewana3_0856 0.73 -3.3 996,513 - Shewana3_0856 0.74 -3.5 996,538 + Shewana3_0856 0.76 -3.3 996,651 - Shewana3_0856 0.82 -3.5 996,745 - Shewana3_0856 0.88 -4.2 997,303 + Shewana3_0857 0.45 -3.6 997,303 + Shewana3_0857 0.45 -5.3 997,571 + Shewana3_0857 0.79 -4.1 998,035 + +0.4 998,035 + +0.2 998,176 + -0.4 998,219 - +0.0 998,239 - +0.1 998,259 - -1.6 998,334 + +0.6 998,690 + Shewana3_0858 0.35 -1.0
Or see this region's nucleotide sequence