Strain Fitness in Shewanella sp. ANA-3 around Shewana3_0733
Experiment: Carbon source Sucrose 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Carbon source Sucrose 5 mM |
---|---|---|---|---|---|
remove | |||||
851,226 | - | +0.8 | |||
851,460 | + | -1.4 | |||
851,548 | + | Shewana3_0733 | 0.32 | -1.0 | |
851,616 | - | Shewana3_0733 | 0.38 | -2.7 | |
851,668 | - | Shewana3_0733 | 0.43 | -1.5 | |
851,891 | + | Shewana3_0733 | 0.64 | -1.4 | |
852,153 | + | Shewana3_0733 | 0.88 | -0.5 | |
852,237 | - | -2.1 | |||
852,400 | - | +0.3 | |||
852,435 | + | +0.4 | |||
852,588 | + | +0.1 | |||
852,862 | - | Shewana3_0734 | 0.14 | +0.2 | |
852,912 | - | Shewana3_0734 | 0.18 | -0.4 | |
852,967 | - | Shewana3_0734 | 0.24 | +0.1 | |
853,112 | - | Shewana3_0734 | 0.37 | -0.3 |
Or see this region's nucleotide sequence