Strain Fitness in Shewanella sp. ANA-3 around Shewana3_0712

Experiment: Carbon source Sucrose 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Sucrose 5 mM
826,249	-		Shewana3_0711	0.72	-0.2
826,249	-		Shewana3_0711	0.72	+0.0
826,263	-		Shewana3_0711	0.73	+0.4
826,277	+		Shewana3_0711	0.74	+1.2
826,332	+		Shewana3_0711	0.79	-0.0
826,387	-		Shewana3_0711	0.83	-0.8
826,405	-		Shewana3_0711	0.85	+0.8
826,446	-		Shewana3_0711	0.88	-0.2
826,456	+		Shewana3_0711	0.89	-0.2
826,464	-		Shewana3_0711	0.89	+1.0
826,466	+		Shewana3_0711	0.90	-0.2
826,466	+		Shewana3_0711	0.90	+0.5
826,467	-		Shewana3_0711	0.90	-0.1
826,474	-				-0.9
826,491	+				-0.6
826,491	+				-1.9
826,491	-				-0.2
826,494	-				+0.7
826,496	+				-0.8
826,499	-				+0.2
826,499	-				+0.9
826,499	-				-0.2
826,506	+				-0.3
826,506	+				+0.1
826,506	+				-0.1
826,514	-				-0.8
826,514	-				-0.6
826,515	+				+0.9
826,515	+				-1.6
826,515	+				+0.9
826,522	-				-1.0
826,523	-				+1.8
826,523	-				+0.4
826,536	-				-0.1
826,538	+				-0.2
826,539	+				-0.1
826,561	+				+0.7
826,572	+				+0.4
826,572	+				+0.0
826,580	-				+0.4
826,580	-				-0.1
826,580	-				-0.1
826,580	-				+0.5
826,580	-				+0.7
826,580	-				-0.7
826,589	+				-0.4
826,662	+				-0.7
826,662	+				+0.2
826,662	+				-0.5
826,662	+				-0.1
826,693	+				+1.4
826,693	+				-0.6
826,693	+				-0.8
826,693	+				-0.5
826,701	-				-0.6
826,701	-				+0.4
826,701	-				-0.8
826,701	-				-0.0
826,891	-				-0.2
826,906	+				-1.3
826,906	+				+0.3
826,906	+				+1.2
826,906	+				-0.4
826,906	+				+1.0
826,906	+				-0.9
826,906	+				+0.9
826,914	-				-0.4
826,914	-				+1.1
826,914	-				+0.9
826,914	-				+0.9
826,914	-				+0.4
826,914	-				+1.4
826,941	-				-0.2
826,964	+				-0.5
826,966	+				+0.4
826,974	-				-1.4
827,052	+				-0.5
827,052	+				+0.7
827,123	-				-0.8
827,279	+				+0.3
827,279	+				-0.9
827,280	+				-1.0
827,282	-				+0.9
827,298	+				-0.0
827,301	-				+0.3
827,306	-				-0.0
827,306	-				-0.7
827,322	+				-0.5
827,334	+				+0.2
827,337	-				-0.1
827,337	-				+0.8
827,337	-				+1.1
827,337	-				-0.2
827,341	-				+0.8
827,342	-				-0.8
827,356	-				-0.1
827,361	-				-2.2
827,367	+				-0.1
827,405	+				+0.1
827,480	+		Shewana3_0712	0.11	+0.2
827,488	-		Shewana3_0712	0.12	+0.9
827,488	-		Shewana3_0712	0.12	-1.3
827,488	-		Shewana3_0712	0.12	+0.1
827,490	+		Shewana3_0712	0.12	+0.1
827,498	-		Shewana3_0712	0.12	+0.9
827,541	-		Shewana3_0712	0.14	+0.1
827,614	+		Shewana3_0712	0.17	+0.3
827,645	-		Shewana3_0712	0.19	-0.4
827,708	+		Shewana3_0712	0.22	+0.2
827,708	+		Shewana3_0712	0.22	-1.5
827,754	-		Shewana3_0712	0.24	+1.0
827,779	+		Shewana3_0712	0.25	-1.2
827,906	-		Shewana3_0712	0.31	+0.3
827,930	+		Shewana3_0712	0.32	+0.2
827,938	-		Shewana3_0712	0.32	+0.0
828,022	+		Shewana3_0712	0.36	+0.4
828,064	-		Shewana3_0712	0.38	+0.7
828,122	+		Shewana3_0712	0.41	+0.7
828,173	-		Shewana3_0712	0.43	+1.1
828,235	-		Shewana3_0712	0.46	-1.7
828,258	-		Shewana3_0712	0.47	-0.1
828,425	+		Shewana3_0712	0.54	-0.4
828,623	-		Shewana3_0712	0.63	+0.9
828,638	+		Shewana3_0712	0.64	+0.4
828,878	-		Shewana3_0712	0.75	+1.5
828,980	-		Shewana3_0712	0.80	-0.8
829,083	+		Shewana3_0712	0.84	+0.5
829,210	+				+2.0
829,393	+				-0.7
829,398	+				+1.8