Strain Fitness in Shewanella sp. ANA-3 around Shewana3_0677

Experiment: Carbon source Sucrose 5 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntShewana3_0675 and Shewana3_0676 overlap by 4 nucleotidesShewana3_0676 and Shewana3_0677 overlap by 1 nucleotidesShewana3_0677 and Shewana3_0678 are separated by 562 nucleotides Shewana3_0675: Shewana3_0675 - hypothetical protein (RefSeq), at 794,811 to 795,371 _0675 Shewana3_0676: Shewana3_0676 - 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (RefSeq), at 795,368 to 795,919 _0676 Shewana3_0677: Shewana3_0677 - KpsF/GutQ family protein (RefSeq), at 795,919 to 796,896 _0677 Shewana3_0678: Shewana3_0678 - ABC transporter related (RefSeq), at 797,459 to 798,277 _0678 Position (kb) 795 796 797Strain fitness (log2 ratio) -1 0 1 2at 796.987 kb on - strandat 797.034 kb on - strandat 797.366 kb on - strandat 797.409 kb on + strandat 797.651 kb on + strand, within Shewana3_0678at 797.664 kb on + strand, within Shewana3_0678at 797.778 kb on + strand, within Shewana3_0678

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Per-strain Table

Position Strand Gene LocusTag Fraction Carbon source Sucrose 5 mM
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796,987 - -0.7
797,034 - +0.3
797,366 - +0.2
797,409 + -0.3
797,651 + Shewana3_0678 0.23 +0.2
797,664 + Shewana3_0678 0.25 +1.8
797,778 + Shewana3_0678 0.39 +0.8

Or see this region's nucleotide sequence