Experiment: Carbon source Sucrose 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shewana3_0638 and Shewana3_0639 overlap by 1 nucleotides Shewana3_0639 and Shewana3_0640 are separated by 42 nucleotides Shewana3_0640 and Shewana3_0641 overlap by 13 nucleotides
Shewana3_0638: Shewana3_0638 - smc-like chromosome partitioning protein (DUF3584) <small>(from data)</small>, at 751,959 to 755,630
_0638
Shewana3_0639: Shewana3_0639 - predicted chromosome partitioning protein (with smc-like Shewana3_0638) <small>(from data)</small>, at 755,630 to 756,295
_0639
Shewana3_0640: Shewana3_0640 - predicted chromosome partitioning protein (with smc-like Shewana3_0638) <small>(from data)</small>, at 756,338 to 757,558
_0640
Shewana3_0641: Shewana3_0641 - hypothetical protein (RefSeq), at 757,546 to 758,418
_0641
Position (kb) 756
757
758 Strain fitness (log2 ratio) -2
-1
0
1 at 755.425 kb on - strand at 755.513 kb on - strand at 755.578 kb on - strand at 755.642 kb on - strand at 755.695 kb on - strand at 755.784 kb on - strand, within Shewana3_0639 at 755.935 kb on + strand, within Shewana3_0639 at 756.164 kb on - strand, within Shewana3_0639 at 756.164 kb on - strand, within Shewana3_0639 at 756.242 kb on + strand at 756.442 kb on + strand at 756.515 kb on - strand, within Shewana3_0640 at 756.553 kb on + strand, within Shewana3_0640 at 756.558 kb on + strand, within Shewana3_0640 at 756.634 kb on + strand, within Shewana3_0640 at 756.662 kb on - strand, within Shewana3_0640 at 756.727 kb on + strand, within Shewana3_0640 at 756.747 kb on + strand, within Shewana3_0640 at 756.905 kb on - strand, within Shewana3_0640 at 757.034 kb on + strand, within Shewana3_0640 at 757.133 kb on + strand, within Shewana3_0640 at 757.228 kb on + strand, within Shewana3_0640 at 757.255 kb on + strand, within Shewana3_0640 at 757.257 kb on + strand, within Shewana3_0640 at 757.462 kb on + strand at 757.470 kb on - strand at 757.476 kb on - strand at 757.604 kb on + strand at 757.610 kb on + strand at 757.610 kb on + strand at 757.766 kb on + strand, within Shewana3_0641 at 758.183 kb on - strand, within Shewana3_0641 at 758.189 kb on + strand, within Shewana3_0641 at 758.244 kb on + strand, within Shewana3_0641 at 758.252 kb on - strand, within Shewana3_0641
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source Sucrose 5 mM remove 755,425 - +0.3 755,513 - -0.9 755,578 - +0.5 755,642 - +0.7 755,695 - -0.2 755,784 - Shewana3_0639 0.23 +1.1 755,935 + Shewana3_0639 0.46 -0.2 756,164 - Shewana3_0639 0.80 +0.6 756,164 - Shewana3_0639 0.80 -0.3 756,242 + -0.7 756,442 + +0.0 756,515 - Shewana3_0640 0.14 +0.8 756,553 + Shewana3_0640 0.18 +0.9 756,558 + Shewana3_0640 0.18 -0.7 756,634 + Shewana3_0640 0.24 +1.4 756,662 - Shewana3_0640 0.27 +1.2 756,727 + Shewana3_0640 0.32 +0.4 756,747 + Shewana3_0640 0.33 +1.2 756,905 - Shewana3_0640 0.46 -1.2 757,034 + Shewana3_0640 0.57 +0.6 757,133 + Shewana3_0640 0.65 +0.0 757,228 + Shewana3_0640 0.73 +0.9 757,255 + Shewana3_0640 0.75 -1.4 757,257 + Shewana3_0640 0.75 -0.5 757,462 + +0.7 757,470 - -0.2 757,476 - +0.4 757,604 + -0.8 757,610 + +0.5 757,610 + +0.2 757,766 + Shewana3_0641 0.25 -2.2 758,183 - Shewana3_0641 0.73 -1.3 758,189 + Shewana3_0641 0.74 -0.0 758,244 + Shewana3_0641 0.80 -0.7 758,252 - Shewana3_0641 0.81 +1.0
Or see this region's nucleotide sequence