Strain Fitness in Shewanella sp. ANA-3 around Shewana3_0432
Experiment: Carbon source Sucrose 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Carbon source Sucrose 5 mM |
---|---|---|---|---|---|
remove | |||||
500,187 | + | Shewana3_0431 | 0.69 | -0.8 | |
500,508 | - | Shewana3_0431 | 0.84 | -0.7 | |
500,585 | - | Shewana3_0431 | 0.88 | +0.1 | |
500,705 | + | +0.1 | |||
500,722 | + | -0.4 | |||
500,751 | - | +0.3 | |||
500,899 | + | -0.6 | |||
500,899 | + | -0.7 | |||
501,064 | - | Shewana3_0432 | 0.26 | -0.5 | |
501,124 | + | Shewana3_0432 | 0.35 | -3.2 | |
501,149 | + | Shewana3_0432 | 0.39 | +0.4 | |
501,157 | - | Shewana3_0432 | 0.40 | +0.5 | |
501,337 | - | Shewana3_0432 | 0.67 | +0.7 | |
501,582 | - | +0.6 | |||
501,784 | + | -0.9 | |||
501,881 | + | -0.6 | |||
501,886 | - | +0.3 |
Or see this region's nucleotide sequence